RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 GPR31O00270 319 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 PLA2G10O15496 165 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 RNASE1P07998 156 aaKnown RBP11.31□□□□□ -0.6
VPS25-201ENST00000253794 FAM106CPP0CH98 169 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 INPP1P49441 399 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 RPL15P61313 204 aaKnown RBP11.31□□□□□ -0.6
VPS25-201ENST00000253794 RND3P61587 244 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
VPS25-201ENST00000253794 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 LINC00473A8K010 186 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 SNRNP70P08621 437 aaKnown RBP11.3□□□□□ -0.6
VPS25-201ENST00000253794 BTCP35070 178 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 RAB13P51153 203 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
VPS25-201ENST00000253794 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 C16orf82Q7Z2V1 217 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 ZFAND1Q8TCF1 268 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 ZFAND2BQ8WV99 257 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 RNF5Q99942 180 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 SLC25A21Q9BQT8 299 aaPredicted RBP11.3□□□□□ -0.6
VPS25-201ENST00000253794 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 GPR132Q9UNW8 380 aa11.3□□□□□ -0.6
VPS25-201ENST00000253794 CENPXA8MT69 81 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS25-201ENST00000253794 OR2F2O95006 317 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 MOSP00540 346 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 APOA2P02652 100 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 RRASP10301 218 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 IFITM3Q01628 133 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 ASAH1Q13510 395 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 DHRS7BQ6IAN0 325 aaPredicted RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 CCBE1Q6UXH8 406 aaPredicted RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 TCTEX1D1Q8N7M0 179 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 OR8H1Q8NGG4 311 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 MARCH1Q8TCQ1 289 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 CAPSLQ8WWF8 208 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 SCGB3A2Q96PL1 93 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 SLC2A9Q9NRM0 540 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 FAM212BQ9NTI7 297 aaPredicted RBP11.29□□□□□ -0.6
VPS25-201ENST00000253794 TBC1D24Q9ULP9 559 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
VPS25-201ENST00000253794 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 RNF212BA8MTL3 300 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 LYRM1O43325 122 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 PGLYRP1O75594 196 aaPredicted RBP11.28□□□□□ -0.6
VPS25-201ENST00000253794 KIR2DS2P43631 304 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 LINC00205P59089 165 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 CATR1Q13166 79 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 GLDNQ6ZMI3 551 aaPredicted RBP11.28□□□□□ -0.6
VPS25-201ENST00000253794 KCTD9Q7L273 389 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
VPS25-201ENST00000253794 C5orf66Q9H5L9 145 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 PRELID3BQ9Y3B1 194 aa11.28□□□□□ -0.6
VPS25-201ENST00000253794 TRIM77I1YAP6 450 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 CHST1O43916 411 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 GPR137BO60478 399 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 PGAM2P15259 253 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 TMEM11P17152 192 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 CD24P25063 80 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 S100GP29377 79 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 SLC6A1P30531 599 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 RBMS2Q15434 407 aaKnown RBP11.27□□□□□ -0.61
VPS25-201ENST00000253794 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 C16orf87Q6PH81 154 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 NPBQ8NG41 125 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 CD300LFQ8TDQ1 290 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 RTBDNQ9BSG5 229 aaPredicted RBP11.27□□□□□ -0.61
VPS25-201ENST00000253794 PALMDQ9NP74 551 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 PLSCR3Q9NRY6 295 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 SLC35D1Q9NTN3 355 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.61
VPS25-201ENST00000253794 M0QZK8 103 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 FGF16O43320 207 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 TNFSF12O43508 249 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 B3GALNT1O75752 331 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 NDUFB6O95139 128 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 NDUFA3O95167 84 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 SPDEFO95238 335 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 F2RP25116 425 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 LY6EQ16553 131 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms