RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RAB40CQ96S21 281 aa8.04□□□□□ -1.12
PHGDH-215ENST00000641371 RNF126Q9BV68 326 aa8.04□□□□□ -1.12
PHGDH-215ENST00000641371 SDHAF2Q9NX18 166 aa8.04□□□□□ -1.12
PHGDH-215ENST00000641371 MMP24Q9Y5R2 645 aa8.04□□□□□ -1.12
PHGDH-215ENST00000641371 DOCK11Q5JSL3 2073 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 A0A087X0M5 115 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 A0A1B0GX30 115 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 RNF222A6NCQ9 220 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 MPTX1A8MV57 137 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 TNFSF12O43508 249 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 HPRT1P00492 218 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 MBPP02686 304 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 TPT1P13693 172 aaKnown RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 ZNF16P17020 682 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 DUTP33316 252 aaKnown RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 EFNA4P52798 201 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 ERVK-16P61578 105 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 VAMP2P63027 116 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 ID3Q02535 119 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 BAXQ07812 192 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 SPAG16Q8N0X2 631 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 OR4S2Q8NH73 311 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 OR1S1Q8NH92 325 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 C8orf46Q8TAG6 207 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 STOML3Q8TAV4 291 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 ZNF596Q8TC21 504 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 SCARB1Q8WTV0 552 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 H1FXQ92522 213 aaKnown RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 DCTN5Q9BTE1 182 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 IFI27L2Q9H2X8 130 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 HEXA-AS1Q9H8Q6 139 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 ZC4H2Q9NQZ6 224 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 DCAF16Q9NXF7 216 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 PRR13Q9NZ81 148 aa8.03□□□□□ -1.12
PHGDH-215ENST00000641371 LSM5Q9Y4Y9 91 aaKnown RBP8.03□□□□□ -1.12
PHGDH-215ENST00000641371 USF3Q68DE3 2245 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 IGHV3-43A0A0B4J1X8 118 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 F5H0A9 414 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-215ENST00000641371 TOR1AO14656 332 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 PITX3O75364 302 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 JTBO76095 146 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 SCGB1D2O95969 90 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 F12P00748 615 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-215ENST00000641371 TFF1P04155 84 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 GAPDHP04406 335 aaKnown RBP8.02□□□□□ -1.13
PHGDH-215ENST00000641371 SOD3P08294 240 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 IGHV3-43DP0DP04 118 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 SELLP14151 372 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 RPL12P30050 165 aaKnown RBP8.02□□□□□ -1.13
PHGDH-215ENST00000641371 SSTR2P30874 369 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 LPAR6P43657 344 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 TAS2R30P59541 319 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 RPL23AP62750 156 aaKnown RBP8.02□□□□□ -1.13
PHGDH-215ENST00000641371 HOXA4Q00056 320 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF585BQ52M93 769 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 TMEM200BQ69YZ2 307 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 TCF23Q7RTU1 214 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 C5orf24Q7Z6I8 188 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF439Q8NDP4 499 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 UBALD1Q8TB05 177 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 TMEM186Q96B77 213 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 UBTD1Q9HAC8 227 aa8.02□□□□□ -1.13
PHGDH-215ENST00000641371 BORCS7-ASMTA0A0B4J1R7 106 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 C17orf98A8MV24 154 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 H0YIZ8 118 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 M0R1X1 148 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 TXNL1O43396 289 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 PPIHO43447 177 aaKnown RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 NQO2P16083 231 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 COL8A2P25067 703 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 NFYBP25208 207 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 GPR6P46095 362 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF137PP52743 207 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 LTC4SQ16873 150 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 RTL8BQ17RB0 113 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 MIDNQ504T8 468 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 CLLU1Q5K131 121 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 TGIF2LYQ8IUE0 185 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 FGFRL1Q8N441 504 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF843Q8N446 348 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 OR9G1Q8NH87 305 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 ST8SIA2Q92186 375 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 CIB3Q96Q77 187 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 PCGF1Q9BSM1 259 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF471Q9BX82 626 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 GSX2Q9BZM3 304 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 PARP12Q9H0J9 701 aaKnown RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 PATZ1Q9HBE1 687 aaKnown RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 BARX1Q9HBU1 254 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 C19orf12Q9NSK7 152 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 OR5AC2Q9NZP5 309 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 CTSZQ9UBR2 303 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 RNF150Q9ULK6 438 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 AMMECR1Q9Y4X0 333 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-215ENST00000641371 WSB1Q9Y6I7 421 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 SESN1Q9Y6P5 492 aa8.01□□□□□ -1.13
PHGDH-215ENST00000641371 M0R1W7 72 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms