RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RRHO14718 337 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 CD3GP09693 182 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 MYL9P24844 172 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 GABARAPL2P60520 117 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 DEFB121Q5J5C9 76 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 C22orf42Q6IC83 251 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 NR2C2APQ86WQ0 139 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 OR5AN1Q8NGI8 311 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 C4orf3Q8WVX3 66 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 PTX4Q96A99 478 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 RAB3CQ96E17 227 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 GNB4Q9HAV0 340 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 RDH8Q9NYR8 311 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 WASHC3Q9Y3C0 194 aa13.38□□□□□ -0.27
HMGN3-203ENST00000620514 SMIM30A4D0T7 59 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 GSTP1P09211 210 aaKnown RBP13.37□□□□□ -0.27
HMGN3-203ENST00000620514 RAB3BP20337 219 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 MC5RP33032 325 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 CHCHD6Q9BRQ6 235 aa13.37□□□□□ -0.27
HMGN3-203ENST00000620514 A0A075B6Q4 140 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 RAB27BO00194 218 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 MFNGO00587 321 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 FABP7O15540 132 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 FCGR3AP08637 254 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 GSTT2P0CG29 244 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 GSTT2BP0CG30 244 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 GNB3P16520 340 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 RANBP1P43487 201 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 LUMP51884 338 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-203ENST00000620514 CX3CL1P78423 397 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 PLGLAQ15195 96 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 IGSF11Q5DX21 431 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 UBE2UQ5VVX9 321 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 TMEM65Q6PI78 240 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 SPARTQ8N0X7 666 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 ZNF491Q8N8L2 437 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 ZNF383Q8NA42 475 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 MINDY2Q8NBR6 621 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 OR11H1Q8NG94 326 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 OR5B12Q96R08 314 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 CLCC1Q96S66 551 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 ZNF221Q9UK13 617 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 GAB2Q9UQC2 676 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 A3GALT2U3KPV4 340 aa13.36□□□□□ -0.27
HMGN3-203ENST00000620514 BET1O15155 118 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 SOX15O60248 233 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 RBBP9O75884 186 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 IGKV1-16P04430 117 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 EGR2P11161 476 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-203ENST00000620514 RAB6AP20340 208 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 PSMB9P28065 219 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 MRPS15P82914 257 aaKnown RBP13.35□□□□□ -0.27
HMGN3-203ENST00000620514 FHL3Q13643 280 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 PSG5Q15238 335 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 ZNF660Q6AZW8 331 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-203ENST00000620514 OR4A4PQ8NGN8 299 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 OR5M8Q8NGP6 311 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 CASTOR1Q8WTX7 329 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 ZNF230Q9UIE0 474 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-203ENST00000620514 VSIG4Q9Y279 399 aa13.35□□□□□ -0.27
HMGN3-203ENST00000620514 A0A1W2PN81 502 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 I3L521 148 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 M0R1X1 148 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 MRPS14O60783 128 aaKnown RBP13.34□□□□□ -0.27
HMGN3-203ENST00000620514 TFAP2AP05549 437 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 HIST1H1DP16402 221 aaKnown RBP13.34□□□□□ -0.27
HMGN3-203ENST00000620514 GALP22466 123 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 GADD45AP24522 165 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 CHRNA7P36544 502 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 RAB9AP51151 201 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 CRIP2P52943 208 aaPredicted RBP13.34□□□□□ -0.27
HMGN3-203ENST00000620514 GNB1P62873 340 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 ABHD5Q8WTS1 349 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 FAM103A1Q9BTL3 118 aaKnown RBP13.34□□□□□ -0.27
HMGN3-203ENST00000620514 CABLES2Q9BTV7 478 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 TOLLIPQ9H0E2 274 aa13.34□□□□□ -0.27
HMGN3-203ENST00000620514 METTL1Q9UBP6 276 aaKnown RBP13.34□□□□□ -0.27
HMGN3-203ENST00000620514 ELF5Q9UKW6 265 aaPredicted RBP13.34□□□□□ -0.27
HMGN3-203ENST00000620514 OR8U9P0C7N5 309 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 SERPINB10P48595 397 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
HMGN3-203ENST00000620514 DGCR2P98153 550 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 OR1N2Q8NGR9 330 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 C5orf30Q96GV9 206 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 RNF5Q99942 180 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 ALX4Q9H161 411 aaPredicted RBP13.33□□□□□ -0.28
HMGN3-203ENST00000620514 OR2D2Q9H210 308 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 TPSG1Q9NRR2 321 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 TXNL4BQ9NX01 149 aaKnown RBP13.33□□□□□ -0.28
HMGN3-203ENST00000620514 NUBP2Q9Y5Y2 271 aa13.33□□□□□ -0.28
HMGN3-203ENST00000620514 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
HMGN3-203ENST00000620514 TRBV6-7A0A0A0MS04 114 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms