RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 AADACP22760 399 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 CD81P60033 236 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 FXYD3Q14802 87 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 CBR4Q8N4T8 237 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 OR2K2Q8NGT1 345 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 PYDC1Q8WXC3 89 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 FAM46BQ96A09 425 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 SULT4A1Q9BR01 284 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 PARP12Q9H0J9 701 aaKnown RBP11.33□□□□□ -0.6
XRCC1-209ENST00000599693 BABAM2Q9NXR7 383 aa11.33□□□□□ -0.6
XRCC1-209ENST00000599693 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
XRCC1-209ENST00000599693 ITGB1BP1O14713 200 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 SLC25A17O43808 307 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 TPPPO94811 219 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 OR2A4O95047 310 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 CPEP16870 476 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
XRCC1-209ENST00000599693 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 NEURL2Q9BR09 285 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 AGMATQ9BSE5 352 aa11.32□□□□□ -0.6
XRCC1-209ENST00000599693 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
XRCC1-209ENST00000599693 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
XRCC1-209ENST00000599693 BRI3O95415 125 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
XRCC1-209ENST00000599693 DCKP27707 260 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 CAPGP40121 348 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 RASSF2P50749 326 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 RPS16P62249 146 aaKnown RBP11.31□□□□□ -0.6
XRCC1-209ENST00000599693 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
XRCC1-209ENST00000599693 DEFA5Q01523 94 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 ZNF880Q6PDB4 577 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 NKAIN3Q8N8D7 197 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 BVESQ8NE79 360 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 PGLYRP3Q96LB9 341 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 TMEM68Q96MH6 324 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 FAAP24Q9BTP7 215 aa11.31□□□□□ -0.6
XRCC1-209ENST00000599693 TINAGL1Q9GZM7 467 aaPredicted RBP11.31□□□□□ -0.6
XRCC1-209ENST00000599693 KMT2AQ03164 3969 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 LOC100130705A0A1B0GUX0 176 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 H3BNX3 289 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 CIB2O75838 187 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 CNIH1O95406 144 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 LY6G6CO95867 125 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 NAPSAO96009 420 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 DYRK1AQ13627 763 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 SMN1Q16637 294 aaKnown RBP11.3□□□□□ -0.6
XRCC1-209ENST00000599693 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 ZFP41Q8N8Y5 198 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
XRCC1-209ENST00000599693 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 USMG5Q96IX5 58 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 DERL3Q96Q80 235 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 SLC29A1Q99808 456 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 UQCC2Q9BRT2 126 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 CHMP1AQ9HD42 196 aaPredicted RBP11.3□□□□□ -0.6
XRCC1-209ENST00000599693 SLC2A8Q9NY64 477 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 PEMTQ9UBM1 199 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 GHRLQ9UBU3 117 aa11.3□□□□□ -0.6
XRCC1-209ENST00000599693 AIREO43918 545 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 PROP1O75360 226 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 WBP4O75554 376 aaKnown RBP11.29□□□□□ -0.6
XRCC1-209ENST00000599693 APOA2P02652 100 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 CD7P09564 240 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 MYL12AP19105 171 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 CD300EQ496F6 205 aaPredicted RBP11.29□□□□□ -0.6
XRCC1-209ENST00000599693 C6orf201Q7Z4U5 140 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 ZNF383Q8NA42 475 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 SETD6Q8TBK2 473 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 C11orf54Q9H0W9 315 aaPredicted RBP11.29□□□□□ -0.6
XRCC1-209ENST00000599693 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 OR1A1Q9P1Q5 309 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 CLEC2DQ9UHP7 191 aa11.29□□□□□ -0.6
XRCC1-209ENST00000599693 DIMT1Q9UNQ2 313 aaKnown RBP11.29□□□□□ -0.6
XRCC1-209ENST00000599693 EXOSC1Q9Y3B2 195 aaKnown RBP11.29□□□□□ -0.6
XRCC1-209ENST00000599693 A0A0B4J203 849 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 IRGMA1A4Y4 181 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 ZNF785A8K8V0 405 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 CEACAM6P40199 344 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 LGALS7P47929 136 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 LINC00205P59089 165 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 SNAPC3Q92966 411 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
XRCC1-209ENST00000599693 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
XRCC1-209ENST00000599693 DYNC1I1O14576 645 aa11.27□□□□□ -0.61
XRCC1-209ENST00000599693 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
XRCC1-209ENST00000599693 UBBP0CG47 229 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms