RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TMEM265A0A087WTH1 108 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 HERVK_113P61574 105 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 TMEM25Q86YD3 366 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 AQP3Q92482 292 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 PPDPFQ9H3Y8 114 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 BEX4Q9NWD9 120 aaPredicted RBP7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 A0A1B0GTI1 187 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 FCN3O75636 299 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 PRSS1P07477 247 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 IGLL1P15814 213 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 MFAP2P55001 183 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 OR51G1Q8NGK1 321 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 CRYGNQ8WXF5 182 aa7.78□□□□□ -1.16
GTF2A1-203ENST00000553612 OOEPA6NGQ2 149 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 SOCS1O15524 211 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 IL4P05112 153 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 C1QTNF9P0C862 333 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 KIR2DL2P43627 348 aaPredicted RBP7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 TCTEX1D4Q5JR98 221 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 FAM159AQ6UWV7 190 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 AMTNQ6UX39 209 aa7.77□□□□□ -1.16
GTF2A1-203ENST00000553612 C5orf49A4QMS7 147 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 K7EQS6 105 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 FUT7Q11130 342 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 FAM71E1Q6IPT2 247 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 HSD11B1LQ7Z5J1 315 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 APOBEC3DQ96AK3 386 aaPredicted RBP7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 MCTS1Q9ULC4 181 aaKnown RBP7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 BRWD1Q9NSI6 2320 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 LINC01553A4QN01 128 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 CRYGCP07315 174 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 KIAA0040Q15053 153 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 UNQ9370/PRO34162Q6UXP9 181 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 FZR1Q9UM11 496 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 B9D1Q9UPM9 204 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 TSPOAP1O95153 1857 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 F2Z2F3 143 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 H3BMG7 143 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 TNXAQ16473 311 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 SCGB1D4Q6XE38 83 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 ABHD17AQ96GS6 310 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 C19orf25Q9UFG5 118 aaPredicted RBP7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A087WV48 116 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 GLMPQ8WWB7 406 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 CDK5RAP2Q96SN8 1893 aa7.77□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1W2PRU2 124 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 MPDU1O75352 247 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 APOBEC1P41238 236 aaKnown RBP7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 OR4C3Q8NH37 302 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNF689Q96CS4 500 aaPredicted RBP7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 SDK1Q7Z5N4 2213 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 LOC102723996A0A087X1L8 192 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 LOC102725191A0A1B0GVB3 256 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 MT-ATP8P03928 68 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 PRB4P10163 310 aaPredicted RBP7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 SPINT3P49223 89 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 EMDP50402 254 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 RAE1P78406 368 aaKnown RBP7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 WFDC3Q8IUB2 231 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 SSC4DQ8WTU2 575 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 KLHDC2Q9Y2U9 406 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 EML2O95834 649 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 CST5P28325 142 aaPredicted RBP7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 LYSMD4Q5XG99 296 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 PIGLQ9Y2B2 252 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 HMGA2P52926 109 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 CD226Q15762 336 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 IGF2-ASQ6U949 168 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 MRGPREQ86SM8 312 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 SYS1Q8N2H4 156 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 TUBGCP6Q96RT7 1819 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 SCN8AQ9UQD0 1980 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNF542PQ5EBM4 170 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 ABHD17BQ5VST6 288 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 C22orf39Q6P5X5 142 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 PAQR9Q6ZVX9 377 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 GGTLC1Q9BX51 225 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 CLEC7AQ9BXN2 247 aa7.76□□□□□ -1.17
GTF2A1-203ENST00000553612 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 FNDC10F2Z333 226 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 K7EN84 100 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 F2RL2O00254 374 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 APOBEC3FQ8IUX4 373 aaKnown RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 VOPP1Q96AW1 172 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 RTBDNQ9BSG5 229 aaPredicted RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 SMIM35A0A1B0GVV1 85 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 C1orf105O95561 183 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 PVRP15151 417 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 CD70P32970 193 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 NANOS3P60323 173 aaKnown RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 MMD2Q8IY49 270 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 SCARF2Q96GP6 870 aaPredicted RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 ST6GALNAC2Q9UJ37 374 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 K7ERJ3 54 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 SRSF10O75494 262 aaKnown RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 NGFRP08138 427 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms