RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ASPHD1Q5U4P2 390 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 MOB1BQ7L9L4 216 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 MRAPQ8TCY5 172 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 MYOZ3Q8TDC0 251 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 CASTOR1Q8WTX7 329 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 RAB3CQ96E17 227 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 OR51J1Q9H342 316 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 GNB4Q9HAV0 340 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 C12orf4Q9NQ89 552 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 RDH8Q9NYR8 311 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 PIPOXQ9P0Z9 390 aa9.83□□□□□ -0.84
HSPG2-212ENST00000493940 NUDT19A8MXV4 375 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 CCL24O00175 119 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 PDCD5O14737 125 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 MRPS14O60783 128 aaKnown RBP9.82□□□□□ -0.84
HSPG2-212ENST00000493940 IGLV1-40P01703 118 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 HLA-DRB1P01911 266 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 HIST1H1DP16402 221 aaKnown RBP9.82□□□□□ -0.84
HSPG2-212ENST00000493940 ZBTB25P24278 435 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 FGF9P31371 208 aaPredicted RBP9.82□□□□□ -0.84
HSPG2-212ENST00000493940 TGFBR1P36897 503 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 MYCNOSP40205 109 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 CDX1P47902 265 aaPredicted RBP9.82□□□□□ -0.84
HSPG2-212ENST00000493940 PSMD7P51665 324 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 SLC35B1P78383 322 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 CX3CL1P78423 397 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 SSBP2P81877 361 aaPredicted RBP9.82□□□□□ -0.84
HSPG2-212ENST00000493940 FAM71F2Q6NXP2 309 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 COMMD1Q8N668 190 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 TOLLIPQ9H0E2 274 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 TPSG1Q9NRR2 321 aa9.82□□□□□ -0.84
HSPG2-212ENST00000493940 TRBV6-7A0A0A0MS04 114 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 RRHO14718 337 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 BET1O15155 118 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 FABP7O15540 132 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 HSPA12AO43301 675 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 ELANEP08246 267 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 RAB6AP20340 208 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 GALP22466 123 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 GADD45AP24522 165 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 MYL9P24844 172 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 EGFEM1PQ0D2K5 195 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 KIR2DS1Q14954 304 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 PSG5Q15238 335 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 MRGPRG-AS1Q2M3A8 158 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 LIN54Q6MZP7 749 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 ZNF491Q8N8L2 437 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 MINDY2Q8NBR6 621 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 OR5H6Q8NGV6 325 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 RCC1LQ96I51 464 aaKnown RBP9.81□□□□□ -0.84
HSPG2-212ENST00000493940 CLCC1Q96S66 551 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
HSPG2-212ENST00000493940 CABLES2Q9BTV7 478 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 YTHDF1Q9BYJ9 559 aaKnown RBP9.81□□□□□ -0.84
HSPG2-212ENST00000493940 PARP11Q9NR21 331 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 ZNF580Q9UK33 172 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 STUB1Q9UNE7 303 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 NUBP2Q9Y5Y2 271 aa9.81□□□□□ -0.84
HSPG2-212ENST00000493940 I3L521 148 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 OR8U9P0C7N5 309 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 VDAC1P21796 283 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 SDC2P34741 201 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 PJVKQ0ZLH3 352 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 CXorf66Q5JRM2 361 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-212ENST00000493940 ZNF773Q6PK81 442 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 OR4A4PQ8NGN8 299 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 OR8U1Q8NH10 309 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 OR5B12Q96R08 314 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 ALX4Q9H161 411 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-212ENST00000493940 ATG5Q9H1Y0 275 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 SDHAF2Q9NX18 166 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 WASHC3Q9Y3C0 194 aa9.8□□□□□ -0.84
HSPG2-212ENST00000493940 HUWE1Q7Z6Z7 4374 aaKnown RBP9.79□□□□□ -0.84
HSPG2-212ENST00000493940 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 OR5H14A6NHG9 310 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 SRRM4A7MD48 611 aaKnown RBP9.79□□□□□ -0.84
HSPG2-212ENST00000493940 NOTOA8MTQ0 251 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 H7C2Y5 167 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 M0R1X1 148 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 ARPC1BO15143 372 aaKnown RBP9.79□□□□□ -0.84
HSPG2-212ENST00000493940 SSX5O60225 188 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 LUMP51884 338 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-212ENST00000493940 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-212ENST00000493940 GNB1P62873 340 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 MXD1Q05195 221 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 FHL3Q13643 280 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 ZNF260Q3ZCT1 412 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 CHCHD6Q9BRQ6 235 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 CENPOQ9BU64 300 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 DAPK2Q9UIK4 370 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 SCOCQ9UIL1 159 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 MGAT4AQ9UM21 535 aa9.79□□□□□ -0.84
HSPG2-212ENST00000493940 J3QRK9 145 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 CRYGBP07316 175 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 GSTP1P09211 210 aaKnown RBP9.78□□□□□ -0.84
HSPG2-212ENST00000493940 MC5RP33032 325 aa9.78□□□□□ -0.84
HSPG2-212ENST00000493940 RAB9AP51151 201 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms