RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	ZNF747	Q9BV97	191 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	PRSS22	Q9GZN4	317 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	NAA50	Q9GZZ1	169 aa	Known RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	MIXL1	Q9H2W2	232 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	PLSCR3	Q9NRY6	295 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF221	Q9UK13	617 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	WASHC3	Q9Y3C0	194 aa		4.07	□□□□□ -1.76
HDAC6-223	ENST00000480525	TET2	Q6N021	2002 aa	Predicted RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525		A6NHS1	94 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	RNF212B	A8MTL3	300 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525		H0YJW9	148 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	PROP1	O75360	226 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	PPY	P01298	95 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	APOA2	P02652	100 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	AMY1A	P04745	511 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	AMY2A	P04746	511 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CSF1	P09603	554 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	RPA2	P15927	270 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	S100A5	P33763	92 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	GPR12	P47775	334 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	TAS2R19	P59542	299 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	AP3S2	P59780	193 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	RND3	P61587	244 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	RELB	Q01201	579 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF45	Q02386	682 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	KLK9	Q2XQG4	91 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CNPY1	Q3B7I2	92 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	AWAT1	Q58HT5	328 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGSF11	Q5DX21	431 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	THOC7	Q6I9Y2	204 aa	Known RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525		Q6ZSV7	163 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CCDC190	Q86UF4	302 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	LHFPL1	Q86WI0	220 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM17	Q86X19	198 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	LYG1	Q8N1E2	194 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	DRAM1	Q8N682	238 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	C5orf56	Q8N8D9	126 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	RNF152	Q8N8N0	203 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM229B	Q8NBD8	167 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR52L2P	Q8NGH6	319 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR10V1	Q8NGI7	309 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	MCFD2	Q8NI22	146 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	LINC01006	Q8NI28	216 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	VSTM2A	Q8TAG5	236 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZFAND1	Q8TCF1	268 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	NUDCD2	Q8WVJ2	157 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	C17orf50	Q8WW18	174 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CAPSL	Q8WWF8	208 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	FCAMR	Q8WWV6	532 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	IL1F10	Q8WWZ1	152 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	C22orf15	Q8WYQ4	148 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	EAF1	Q96JC9	268 aa	Predicted RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	TSNAX	Q99598	290 aa	Known RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CITED1	Q99966	193 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC25A33	Q9BSK2	321 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	IFT46	Q9NQC8	304 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	COMMD3	Q9UBI1	195 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	CACFD1	Q9UGQ2	172 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	KLK9	Q9UKQ9	250 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	MRPS7	Q9Y2R9	242 aa	Known RBP	4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	PRELID3B	Q9Y3B1	194 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	MGAM2	Q2M2H8	2515 aa		4.06	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGHV3OR16-10	A0A075B7F0	116 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGKV1D-8	A0A087WSZ0	117 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	MDFIC2	A0A1B0GVS7	189 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525		A0A1W2PRD5	423 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525		A0A1W2PRF3	423 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525		A0A1W2PRM7	423 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF736	B4DX44	427 aa	Predicted RBP	4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525		H3BUA1	57 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	AP4M1	O00189	453 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC31A2	O15432	143 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	NBR2	O15453	112 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	RGS5	O15539	181 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CHST1	O43916	411 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	HPGDS	O60760	199 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGLV2-14	P01704	120 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SNRNP70	P08621	437 aa	Known RBP	4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CT45A6	P0DMU7	189 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CT45A5	P0DMU8	189 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CT45A7	P0DMV0	189 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM11	P17152	192 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	S100G	P29377	79 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	TNFSF8	P32971	234 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	DUT	P33316	252 aa	Known RBP	4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	MAS1L	P35410	378 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAU	P35544	74 aa	Known RBP	4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR3A3	P47888	321 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	GNG10	P50151	68 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CATR1	Q13166	79 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	CBX3	Q13185	183 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	GNMT	Q14749	295 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	RTL8B	Q17RB0	113 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM209B	Q5JX69	171 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	SPANXN2	Q5MJ10	180 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	UTF1	Q5T230	341 aa		4.05	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF562	Q6V9R5	426 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms