RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 IZUMO4Q1ZYL8 232 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 ETFRF1Q6IPR1 90 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 LOC102723971A0A1B0GUV8 181 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 DBX1A6NMT0 343 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 CLDN14O95500 239 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 ABLIM2Q6H8Q1 611 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 BSCL2Q96G97 398 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-206ENST00000445265 TIMD4Q96H15 378 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 HES7Q9BYE0 225 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 ZNF835Q9Y2P0 537 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 TGIF2-C20orf24A0A0A6YYL0 155 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 GATCO43716 136 aaKnown RBP14.22□□□□□ -0.13
TCOF1-206ENST00000445265 CLCF1Q9UBD9 225 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 RNF7Q9UBF6 113 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 FBP1P09467 338 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 CSN1S1P47710 185 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 DNM1P46Q6ZS02 220 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 TPRX1Q8N7U7 411 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 OR1L4Q8NGR5 311 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 CRYGSP22914 178 aa14.21□□□□□ -0.13
TCOF1-206ENST00000445265 TMEM183BQ1AE95 376 aa14.21□□□□□ -0.13
TCOF1-206ENST00000445265 DRAM1Q8N682 238 aa14.21□□□□□ -0.13
TCOF1-206ENST00000445265 ZNF703Q9H7S9 590 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-206ENST00000445265 NPVFQ9HCQ7 196 aa14.21□□□□□ -0.13
TCOF1-206ENST00000445265 SNRNP200O75643 2136 aaKnown RBP14.21□□□□□ -0.13
TCOF1-206ENST00000445265 PMCHP20382 165 aa14.21□□□□□ -0.13
TCOF1-206ENST00000445265 SRP14P37108 136 aaKnown RBP14.21□□□□□ -0.13
TCOF1-206ENST00000445265 PSG5Q15238 335 aa14.21□□□□□ -0.13
TCOF1-206ENST00000445265 SRP19P09132 144 aaKnown RBP14.21□□□□□ -0.13
TCOF1-206ENST00000445265 FOXD3Q9UJU5 478 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-206ENST00000445265 TMEM204Q9BSN7 226 aa14.21□□□□□ -0.14
TCOF1-206ENST00000445265 DOCK9Q9BZ29 2069 aa14.21□□□□□ -0.14
TCOF1-206ENST00000445265 DEFB124Q8NES8 71 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 RAB24Q969Q5 203 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 CACNA1DQ01668 2161 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 A0A0G2JMM0 328 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 A0A1W2PPB8 328 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 A0A1W2PRS3 328 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 KIR3DP1A8MWS1 328 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 UBE2L3P68036 154 aaKnown RBP14.2□□□□□ -0.14
TCOF1-206ENST00000445265 ARSJQ5FYB0 599 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-206ENST00000445265 NABP1Q96AH0 204 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 PNRC2Q9NPJ4 139 aaKnown RBP14.2□□□□□ -0.14
TCOF1-206ENST00000445265 SPINK4O60575 86 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 CD5P06127 495 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 MDKP21741 143 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-206ENST00000445265 P2RY6Q15077 328 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 TGIF1Q15583 401 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 ZNF826PQ6ZT77 177 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 SMIM15Q7Z3B0 74 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 WDR61Q9GZS3 305 aaKnown RBP14.2□□□□□ -0.14
TCOF1-206ENST00000445265 A0A1W2PN81 502 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 TMEM250H0YL14 139 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 SGMS2Q8NHU3 365 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 RCC1LQ96I51 464 aaKnown RBP14.2□□□□□ -0.14
TCOF1-206ENST00000445265 GP6Q9HCN6 339 aa14.2□□□□□ -0.14
TCOF1-206ENST00000445265 TRAV38-1A0A0B4J264 116 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 PTGDSP41222 190 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 ZIC4Q8N9L1 334 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 ZNF716A6NP11 495 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 M0R296 226 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 GTF3AQ92664 365 aaKnown RBP14.19□□□□□ -0.14
TCOF1-206ENST00000445265 SLC24A4Q8NFF2 622 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 GPR61Q9BZJ8 451 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 TIMM9Q9Y5J7 89 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 PXMP4Q9Y6I8 212 aa14.19□□□□□ -0.14
TCOF1-206ENST00000445265 A0A087WWC5 75 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 ACSM6Q6P461 480 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 GDF9O60383 454 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 KBTBD11O94819 623 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 MPV17P39210 176 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 RPL29P47914 159 aaKnown RBP14.18□□□□□ -0.14
TCOF1-206ENST00000445265 TIPARPQ7Z3E1 657 aaKnown RBP14.18□□□□□ -0.14
TCOF1-206ENST00000445265 HELTA6NFD8 242 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 KLF14Q8TD94 323 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-206ENST00000445265 AMTP48728 403 aa14.18□□□□□ -0.14
TCOF1-206ENST00000445265 AURKAIP1Q9NWT8 199 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-206ENST00000445265 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 J3QR06 171 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 ZG16O60844 167 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 NDUFB4O95168 129 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 SLC25A5P05141 298 aaKnown RBP14.17□□□□□ -0.14
TCOF1-206ENST00000445265 CEBPDP49716 269 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-206ENST00000445265 PAX5Q02548 391 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 ABHD14AQ9BUJ0 271 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 H0Y8G0 127 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 S1PR2O95136 353 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 FAM157CP0CG43 387 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 MOB3BQ86TA1 216 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 WBP1Q96G27 269 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 RHOVQ96L33 236 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 ZNF355PQ9NSJ1 428 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 K7N7A8 449 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 TMPRSS2O15393 492 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 HIST3H3Q16695 136 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 LRRC75BQ2VPJ9 315 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 SLC35E4Q6ICL7 350 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 NOL4LQ96MY1 436 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-206ENST00000445265 PCGF1Q9BSM1 259 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 DMRT1Q9Y5R6 373 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms