RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 DBIP07108 87 aaKnown RBP4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 DLX1P56177 255 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 H2BFSP57053 126 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 LTBQ06643 244 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZNF763Q0D2J5 394 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 IHHQ14623 411 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR8B8Q15620 311 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 DCAF12Q5T6F0 453 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OLFML2AQ68BL7 652 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 GLT8D1Q68CQ7 371 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 WDR82Q6UXN9 313 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 C17orf64Q86WR6 236 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SAMD12Q8N8I0 201 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR4F17Q8NGA8 305 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR4F5Q8NH21 305 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 GPR119Q8TDV5 335 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TMED6Q8WW62 240 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 APOBEC3DQ96AK3 386 aaPredicted RBP4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZNF681Q96N22 645 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR4F4Q96R69 305 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 DCTN5Q9BTE1 182 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TMEM59Q9BXS4 323 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 LPAR5Q9H1C0 372 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 WDR13Q9H1Z4 485 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 POPDC3Q9HBV1 291 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 RAB22AQ9UL26 194 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TNFSF18Q9UNG2 199 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 HDGFL3Q9Y3E1 203 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OARD1Q9Y530 152 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ANKRD36A6QL64 1941 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TRAV14DV4A0A0A6YYC5 116 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 A0A0D9SEW6 157 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR51F1A6NGY5 319 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 HLA-DPB1P04440 258 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TPT1P13693 172 aaKnown RBP4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TCN2P20062 427 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 AZU1P20160 251 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 LOXP28300 417 aaPredicted RBP4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR1E2P47887 323 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 REG1BP48304 166 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 PFN3P60673 137 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 PLCXD2Q0VAA5 305 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 LDLRAD2Q5SZI1 272 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 GFI1BQ5VTD9 330 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TEX36Q5VZQ5 186 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR2T2Q6IF00 324 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SPSB3Q6PJ21 355 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ARL9Q6T311 187 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 DHRS11Q6UWP2 260 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TMEM86BQ8N661 226 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR10G2Q8NGC3 310 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR4K5Q8NGD3 323 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR51Q1Q8NH59 317 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZNRF2Q8NHG8 242 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 NEIL3Q8TAT5 605 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 DOHHQ9BU89 302 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 FBXL15Q9H469 300 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 PDFQ9HBH1 243 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ERG28Q9UKR5 140 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TRAPPC2LQ9UL33 140 aa4.87□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 A0A1B0GTH9 108 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TNFRSF11BO00300 401 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR1I1O60431 355 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 WISP3O95389 354 aaPredicted RBP4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 PIRTP0C851 137 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 FAM106CPP0CH98 169 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 MYOD1P15172 320 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZBTB25P24278 435 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 LMO1P25800 156 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 EMP1P54849 157 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 RPS14P62263 151 aaKnown RBP4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SRSF4Q08170 494 aaKnown RBP4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 LRRC37A5PQ49AS3 106 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SFXN4Q6P4A7 337 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TMEM207Q6UWW9 146 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZNF66Q6ZN08 573 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 MSRB3Q8IXL7 192 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TMEM183AQ8IXX5 376 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SLC35G3Q8N808 338 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 OR4K17Q8NGC6 315 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SMIM4Q8WVI0 70 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 MBD3L1Q8WWY6 194 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 PPCDCQ96CD2 204 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TRIB3Q96RU7 358 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 GLIPR2Q9H4G4 154 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 MED29Q9NX70 200 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 COMMD9Q9P000 198 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 SLC7A7Q9UM01 511 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 EXOSC1Q9Y3B2 195 aaKnown RBP4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 KLF12Q9Y4X4 402 aa4.86□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TRAV30A0A087WSZ9 112 aa4.85□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 TMEM235A6NFC5 223 aa4.85□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 FOXI3A8MTJ6 420 aaPredicted RBP4.85□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 GABRPO00591 440 aa4.85□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 ZNHIT1O43257 154 aa4.85□□□□□ -1.63
ALMS1-IT1-201ENST00000441587 NDUFB6O95139 128 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms