RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TRBV6-7A0A0A0MS04 114 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 TGIF2-C20orf24A0A0A6YYL0 155 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 A0A0J9YXY3 114 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 A0A1B0GW64 132 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 MGAT4DA6NG13 374 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF727A8MUV8 499 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PPP5D1E7EU14 171 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 GABARAPH6UMI1 98 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 M0R036 132 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 DCTN6O00399 190 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 GEMIN2O14893 280 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 B4GALT5O43286 388 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 HCRTO43612 131 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 RAMP1O60894 148 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SYNGR4O95473 234 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 RAB36O95755 333 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 GPR75O95800 540 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PDYNP01213 254 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SERPIND1P05546 499 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 MMP7P09237 267 aaPredicted RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 LIMS3P0CW19 117 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 LIMS4P0CW20 117 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR12D1P0DN82 309 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 TPT1P13693 172 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 GPX2P18283 190 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 CSNK2A2P19784 350 aaPredicted RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 CYP2F1P24903 491 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 DPP4P27487 766 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 IL12BP29460 328 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR10J1P30954 320 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 DLSTP36957 453 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 P2RY2P41231 377 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 CYB561P49447 251 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SULT1A2P50226 295 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 POLR2HP52434 150 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ATP5J2P56134 94 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 MLF1P58340 268 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 UBE2MP61081 183 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 UBE2KP61086 200 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SNRPFP62306 86 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 RANP62826 216 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 CCL7P80098 99 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PITPNAQ00169 270 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 BDH1Q02338 343 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PRDX4Q13162 271 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 C1DQ13901 141 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 INSL4Q14641 139 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 MMDQ15546 238 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 MAPK14Q16539 360 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SLC25A35Q3KQZ1 300 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 C9orf135Q5VTT2 229 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM225Q6GV28 225 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 TRAT1Q6PIZ9 186 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 UNQ5815/PRO19632Q6UWF5 114 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 WDR82Q6UXN9 313 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 DNM1P46Q6ZS02 220 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 DEFB128Q7Z7B8 93 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 VTCN1Q7Z7D3 282 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF429Q86V71 674 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 CALHM1Q8IU99 346 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF567Q8N184 647 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 BATF2Q8N1L9 274 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 KDM8Q8N371 416 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 COMMD1Q8N668 190 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ACOT4Q8N9L9 421 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR10G2Q8NGC3 310 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR52L1Q8NGH7 329 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR4D6Q8NGJ1 314 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR4P4Q8NGL7 312 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR13C4Q8NGS5 318 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR4X1Q8NH49 305 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 OR5W2Q8NH69 310 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 RAB1CQ92928 201 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM106AQ96A25 262 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ADIPOR1Q96A54 375 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 IMP4Q96G21 291 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SFRP2Q96HF1 295 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PANX1Q96RD7 426 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 LYSMD1Q96S90 227 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 MICU1Q9BPX6 476 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF649Q9BS31 505 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 HINT2Q9BX68 163 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ULBP1Q9BZM6 244 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SLC5A7Q9GZV3 580 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 ATG5Q9H1Y0 275 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 RGCCQ9H4X1 137 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PARP11Q9NR21 331 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 SLC17A5Q9NRA2 495 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 PLEKHJ1Q9NW61 149 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 FKBP11Q9NYL4 201 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 DNAJC27Q9NZQ0 273 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 CLN8Q9UBY8 286 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 C14orf166Q9Y224 244 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 FUT9Q9Y231 359 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 RASD1Q9Y272 281 aa2.22□□□□□ -2.05
LINC01040-201ENST00000425048 FBN1P35555 2871 aaKnown RBP2.22□□□□□ -2.05
LINC01040-201ENST00000425048 KIAA1549Q9HCM3 1950 aa2.21□□□□□ -2.05
LINC01040-201ENST00000425048 DOCK8Q8NF50 2099 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 TRBV24-1A0A075B6N3 115 aa2.21□□□□□ -2.06
LINC01040-201ENST00000425048 LOC102724200A0A096LPH7 203 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms