RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 LRRC75BQ2VPJ9 315 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 RPL39P5Q59GN2 51 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 Q8N402 240 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 AKR1E2Q96JD6 320 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 RNF5Q99942 180 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 VPREB3Q9UKI3 123 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 GPR132Q9UNW8 380 aa8.45□□□□□ -1.06
NUP98-205ENST00000397007 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 FAM25GB3EWG6 89 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 IGHV4-59P01825 116 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 RFX2P48378 723 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 IL18Q14116 193 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 STEAP1BQ6NZ63 245 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 S100ZQ8WXG8 99 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 MRPL20Q9BYC9 149 aaKnown RBP8.44□□□□□ -1.06
NUP98-205ENST00000397007 A0A1W2PPE3 182 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 RBFOX2O43251 390 aaKnown RBP eCLIP8.44□□□□□ -1.06
NUP98-205ENST00000397007 PMP2P02689 132 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 VSIG10L2P0DP72 767 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 COX7A1P24310 79 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 ZNF585BQ52M93 769 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 OR5R1Q8NH85 324 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 NEK7Q8TDX7 302 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 ABHD14BQ96IU4 210 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 NOTCH2Q04721 2471 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 IGHV3OR16-10A0A075B7F0 116 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 RBBP9O75884 186 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 SLC22A5O76082 557 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 FBP1P09467 338 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 FAM131AQ6UXB0 335 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
NUP98-205ENST00000397007 C5orf66Q9H5L9 145 aa8.44□□□□□ -1.06
NUP98-205ENST00000397007 RANBP3Q9H6Z4 567 aaPredicted RBP8.44□□□□□ -1.06
NUP98-205ENST00000397007 HOXA3O43365 443 aaPredicted RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 PAX6P26367 422 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 TALDO1P37837 337 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 LINC00205P59089 165 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 SUPT4H1P63272 117 aaKnown RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 ASAH1Q13510 395 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 ZNF66Q6ZN08 573 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 C5orf56Q8N8D9 126 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 WNT10AQ9GZT5 417 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 ZNF702PQ9H963 129 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 CHMP1AQ9HD42 196 aaPredicted RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 TRRAPQ9Y4A5 3859 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 TMEM89A2RUT3 159 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 TIMM23O14925 209 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 OR2F2O95006 317 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 NFYAP23511 347 aaPredicted RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 SLC6A1P30531 599 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 FCGR2CP31995 323 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 GNG10P50151 68 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 TAGLNQ01995 201 aaKnown RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 MEF2DQ14814 521 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 C11orf88Q6PI97 169 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 Q8N9W7 124 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 OR2AK2Q8NG84 335 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 SSMEM1Q8WWF3 244 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 C7orf50Q9BRJ6 194 aaKnown RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 BEX2Q9BXY8 128 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 RGS5O15539 181 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 UPK1BO75841 260 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 IGKV1-39P01597 117 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 GAPDHP04406 335 aaKnown RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 IGKV1D-39P04432 117 aa8.43□□□□□ -1.06
NUP98-205ENST00000397007 PDLIM3Q53GG5 364 aaPredicted RBP8.43□□□□□ -1.06
NUP98-205ENST00000397007 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 BRI3O95415 125 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 AKAIN1P0CW23 69 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 TERB2Q8NHR7 220 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 CHIAQ9BZP6 476 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 ING3Q9NXR8 418 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 C1RLQ9NZP8 487 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 VSIG4Q9Y279 399 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
NUP98-205ENST00000397007 FGF16O43320 207 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 EGR2P11161 476 aaPredicted RBP8.42□□□□□ -1.06
NUP98-205ENST00000397007 NFYBP25208 207 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 S100A5P33763 92 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 CEACAM3P40198 252 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 PDPNQ86YL7 162 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 OR2D2Q9H210 308 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 WNK2Q9Y3S1 2297 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 SRRM4A7MD48 611 aaKnown RBP8.42□□□□□ -1.06
NUP98-205ENST00000397007 M0QYG6 137 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 CTSDP07339 412 aaPredicted RBP8.42□□□□□ -1.06
NUP98-205ENST00000397007 HLA-DMAP28067 261 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 SCGB2A2Q13296 93 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 CCDC144NLQ6NUI1 221 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 PDZD9Q8IXQ8 264 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 ZNF2Q9BSG1 426 aaPredicted RBP8.42□□□□□ -1.06
NUP98-205ENST00000397007 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
NUP98-205ENST00000397007 GNG12Q9UBI6 72 aa8.42□□□□□ -1.06
NUP98-205ENST00000397007 PGLYRP1O75594 196 aaPredicted RBP8.41□□□□□ -1.06
NUP98-205ENST00000397007 IGHV3-7P01780 117 aa8.41□□□□□ -1.06
NUP98-205ENST00000397007 IGKV1-16P04430 117 aa8.41□□□□□ -1.06
NUP98-205ENST00000397007 LUMP51884 338 aaPredicted RBP8.41□□□□□ -1.06
NUP98-205ENST00000397007 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
NUP98-205ENST00000397007 SLC38A6Q8IZM9 456 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms