RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CEACAM3P40198 252 aa21.93■■□□□ 1.1
HDAC3-201ENST00000305264 C9orf139Q6ZV77 190 aa21.93■■□□□ 1.1
HDAC3-201ENST00000305264 BEX2Q9BXY8 128 aa21.93■■□□□ 1.1
HDAC3-201ENST00000305264 GHITMQ9H3K2 345 aa21.93■■□□□ 1.1
HDAC3-201ENST00000305264 CDC42EP3Q9UKI2 254 aa21.93■■□□□ 1.1
HDAC3-201ENST00000305264 RTN4IP1Q8WWV3 396 aaPredicted RBP21.92■■□□□ 1.1
HDAC3-201ENST00000305264 MDFIC2A0A1B0GVS7 189 aa21.92■■□□□ 1.1
HDAC3-201ENST00000305264 PGAM2P15259 253 aa21.92■■□□□ 1.1
HDAC3-201ENST00000305264 UCP3P55916 312 aa21.92■■□□□ 1.1
HDAC3-201ENST00000305264 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.92■■□□□ 1.1
HDAC3-201ENST00000305264 MALSU1Q96EH3 234 aa21.92■■□□□ 1.1
HDAC3-201ENST00000305264 GPHA2Q96T91 129 aa21.92■■□□□ 1.1
HDAC3-201ENST00000305264 S1PR3Q99500 378 aa21.92■■□□□ 1.1
HDAC3-201ENST00000305264 PI3P19957 117 aa21.91■■□□□ 1.1
HDAC3-201ENST00000305264 DCTN2Q13561 401 aaKnown RBP21.91■■□□□ 1.1
HDAC3-201ENST00000305264 PLA1AQ53H76 456 aa21.91■■□□□ 1.1
HDAC3-201ENST00000305264 MRPL20Q9BYC9 149 aaKnown RBP21.91■■□□□ 1.1
HDAC3-201ENST00000305264 PALMDQ9NP74 551 aa21.91■■□□□ 1.1
HDAC3-201ENST00000305264 GAB2Q9UQC2 676 aa21.91■■□□□ 1.1
HDAC3-201ENST00000305264 A0A1W2PPI3 338 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 M0R1X1 148 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 LINC00205P59089 165 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 ZNF816Q0VGE8 651 aaPredicted RBP21.9■■□□□ 1.1
HDAC3-201ENST00000305264 TGIF2LXQ8IUE1 241 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 SLC38A6Q8IZM9 456 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 DRAXINQ8NBI3 349 aaPredicted RBP21.9■■□□□ 1.1
HDAC3-201ENST00000305264 RSRP1Q9BUV0 290 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 FAM96BQ9Y3D0 163 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 TNFSF12O43508 249 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 SLC22A5O76082 557 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 DEFB112Q30KQ8 113 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 FAM71F2Q6NXP2 309 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 POC5Q8NA72 575 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 VSIG4Q9Y279 399 aa21.9■■□□□ 1.1
HDAC3-201ENST00000305264 SLC6A1P30531 599 aa21.89■■□□□ 1.09
HDAC3-201ENST00000305264 PHLDA2Q53GA4 152 aa21.89■■□□□ 1.09
HDAC3-201ENST00000305264 CUBNO60494 3623 aa21.89■■□□□ 1.09
HDAC3-201ENST00000305264 IGHV1-3A0A0C4DH29 117 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 GAPDHP04406 335 aaKnown RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 SRD5A1P18405 259 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 DEFA1P59665 94 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 DEFA3P59666 94 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 EIF4EBP1Q13541 118 aaPredicted RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 RBMS2Q15434 407 aaKnown RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 MZT2BQ6NZ67 158 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 BVESQ8NE79 360 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 RBMXL1Q96E39 390 aaKnown RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 GPR31O00270 319 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 FBP1P09467 338 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 ECI1P42126 302 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 SURF2Q15527 256 aaPredicted RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 MSMO1Q15800 293 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 LPCAT3Q6P1A2 487 aa21.88■■□□□ 1.09
HDAC3-201ENST00000305264 GLDNQ6ZMI3 551 aaPredicted RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 ZNF48Q96MX3 618 aaPredicted RBP21.88■■□□□ 1.09
HDAC3-201ENST00000305264 OOSP1A8MZH6 123 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 CT45A6P0DMU7 189 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 CT45A5P0DMU8 189 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 CT45A7P0DMV0 189 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 AKR1E2Q96JD6 320 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 NABP2Q9BQ15 211 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 C5orf66Q9H5L9 145 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 GPR132Q9UNW8 380 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 TIMM23O14925 209 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 NDUFB6O95139 128 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 SLC25A21Q9BQT8 299 aaPredicted RBP21.87■■□□□ 1.09
HDAC3-201ENST00000305264 SLC2A9Q9NRM0 540 aa21.87■■□□□ 1.09
HDAC3-201ENST00000305264 LINC00473A8K010 186 aa21.86■■□□□ 1.09
HDAC3-201ENST00000305264 TXNL1O43396 289 aa21.86■■□□□ 1.09
HDAC3-201ENST00000305264 DUTP33316 252 aaKnown RBP21.86■■□□□ 1.09
HDAC3-201ENST00000305264 CCDC144NLQ6NUI1 221 aa21.86■■□□□ 1.09
HDAC3-201ENST00000305264 OR8H3Q8N146 312 aa21.86■■□□□ 1.09
HDAC3-201ENST00000305264 ZFAND1Q8TCF1 268 aa21.86■■□□□ 1.09
HDAC3-201ENST00000305264 RTBDNQ9BSG5 229 aaPredicted RBP21.86■■□□□ 1.09
HDAC3-201ENST00000305264 MEGF9Q9H1U4 602 aa21.86■■□□□ 1.09
HDAC3-201ENST00000305264 IGHV3-72A0A0B4J1Y9 119 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 FAM240BA0A1B0GVZ2 78 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 CTSDP07339 412 aaPredicted RBP21.85■■□□□ 1.09
HDAC3-201ENST00000305264 RPL30P62888 115 aaKnown RBP21.85■■□□□ 1.09
HDAC3-201ENST00000305264 NRARPQ7Z6K4 114 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 MOB3BQ86TA1 216 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 CMTM1Q8IZ96 169 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 ZNF383Q8NA42 475 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 ZBTB34Q8NCN2 500 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 CFHR4Q92496 578 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 DPAGT1Q9H3H5 408 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 RLN1P04808 185 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 ZNF486Q96H40 463 aaPredicted RBP21.85■■□□□ 1.09
HDAC3-201ENST00000305264 FLVCR2Q9UPI3 526 aa21.85■■□□□ 1.09
HDAC3-201ENST00000305264 PIGPP57054 158 aa21.84■■□□□ 1.09
HDAC3-201ENST00000305264 TUSC1Q2TAM9 212 aa21.84■■□□□ 1.09
HDAC3-201ENST00000305264 ABCA11PQ4W5N1 156 aa21.84■■□□□ 1.09
HDAC3-201ENST00000305264 ZDHHC22Q8N966 263 aa21.84■■□□□ 1.09
HDAC3-201ENST00000305264 ENKURQ8TC29 256 aa21.84■■□□□ 1.09
HDAC3-201ENST00000305264 OCEL1Q9H607 264 aa21.84■■□□□ 1.09
HDAC3-201ENST00000305264 C14orf166Q9Y224 244 aaKnown RBP21.84■■□□□ 1.09
HDAC3-201ENST00000305264 PGLYRP1O75594 196 aaPredicted RBP21.83■■□□□ 1.09
HDAC3-201ENST00000305264 RAB13P51153 203 aa21.83■■□□□ 1.09
HDAC3-201ENST00000305264 KCTD9Q7L273 389 aa21.83■■□□□ 1.09
HDAC3-201ENST00000305264 ADAD2Q8NCV1 583 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms