RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 HEXA-AS1Q9H8Q6 139 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 PRR13Q9NZ81 148 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 GAB2Q9UQC2 676 aa15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 MAP1AP78559 2803 aaPredicted RBP15.43■□□□□ 0.06
PDLIM3-202ENST00000284770 MPPED1O15442 326 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 TOX4O94842 621 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 OR2A4O95047 310 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 HLA-GP17693 338 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 GPR12P47775 334 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 H2BFSP57053 126 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 TNFRSF14Q92956 283 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 OR2A7Q96R45 310 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 PIPOXQ9P0Z9 390 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 ABCA2Q9BZC7 2435 aa15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 PRRC2AP48634 2157 aaKnown RBP15.42■□□□□ 0.06
PDLIM3-202ENST00000284770 TRAV20A0A0B4J274 112 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 GOSR2O14653 212 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 TOR1AO14656 332 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 RAB29O14966 203 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 S100GP29377 79 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 PRB3Q04118 309 aaPredicted RBP15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 TMEM249Q2WGJ8 235 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 TBC1D26Q86UD7 250 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 ODF3L1Q8IXM7 274 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 LYG1Q8N1E2 194 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 SDHAF2Q9NX18 166 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 ZNRD1Q9P1U0 126 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 KCNIP3Q9Y2W7 256 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 PGLYRP1O75594 196 aaPredicted RBP15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 SIX6O95475 246 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 OR5AC1P0C628 307 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 GATA3P23771 443 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 COX7A1P24310 79 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 PRRX1P54821 245 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 TMEM187Q14656 261 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 DCAF12L2Q5VW00 463 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 KCTD9Q7L273 389 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 PNKDQ8N490 385 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 OR11H6Q8NGC7 330 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 OR5M8Q8NGP6 311 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 OR10X1Q8NGY0 326 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 COQ8AQ8NI60 647 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 TMEM186Q96B77 213 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 MSI2Q96DH6 328 aaKnown RBP15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 C5orf30Q96GV9 206 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 GPHA2Q96T91 129 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 PCGF1Q9BSM1 259 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 HIF1ANQ9NWT6 349 aa15.41■□□□□ 0.06
PDLIM3-202ENST00000284770 TNFSF12O43508 249 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 IGLV1-47P01700 117 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 IGHV4-31P0DP07 118 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 SP6Q3SY56 376 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 HCP5Q6MZN7 132 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 C11orf88Q6PI97 169 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 BEND2Q8NDZ0 799 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 GLYATL2Q8WU03 294 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 TP53RKQ96S44 253 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 TBX15Q96SF7 602 aa15.4■□□□□ 0.06
PDLIM3-202ENST00000284770 SAA2-SAA4A0A096LPE2 208 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 C3orf85A0A1B0GTC6 90 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 PROP1O75360 226 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 GIPP09681 153 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 SAA2P0DJI9 122 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 GZMKP49863 264 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 EIF4EBP1Q13541 118 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 NCR3LG1Q68D85 454 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 WDR89Q96FK6 387 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 HOXB4P17483 251 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 HLA-DRB5Q30154 266 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 RPL39P5Q59GN2 51 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 C1orf229Q6ZS94 237 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 LRTM2Q8N967 370 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 CCDC168Q8NDH2 2452 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 ZNF251Q9BRH9 671 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 CHIAQ9BZP6 476 aa15.39■□□□□ 0.05
PDLIM3-202ENST00000284770 RNASEK-C17orf49H0YIS7 233 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 SMLR1H3BR10 107 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 CCSO14618 274 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 TGFAP01135 160 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 KLRD1Q13241 179 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 ZFP69Q49AA0 526 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 LIAT1Q6ZQX7 453 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 S1PR3Q99500 378 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 RAB18Q9NP72 206 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 ITGB1BP2Q9UKP3 347 aa15.38■□□□□ 0.05
PDLIM3-202ENST00000284770 G3V3Q6 166 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 C1QBP02746 253 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 F2RP25116 425 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 EIF2B2P49770 351 aaKnown RBP15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 ZNF137PP52743 207 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 RAP2BP61225 183 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 SRSF4Q08170 494 aaKnown RBP15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 ZNF66Q6ZN08 573 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 CIARTQ8N365 385 aaPredicted RBP15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 OR4P4Q8NGL7 312 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 HSD17B10Q99714 261 aaKnown RBP15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 TMEM222Q9H0R3 208 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 C7orf69Q9H7B7 122 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 AUP1Q9Y679 476 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms