RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	FBXO24	O75426	580 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	CLEC2L	P0C7M8	214 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554		Q6ZS46	218 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	C5orf24	Q7Z6I8	188 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	OR13F1	Q8NGS4	319 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	KCTD12	Q96CX2	325 aa	Known RBP	11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	NABP2	Q9BQ15	211 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	CABLES2	Q9BTV7	478 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	IFI27L2	Q9H2X8	130 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	MMP27	Q9H306	513 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	ZNF221	Q9UK13	617 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	GAB2	Q9UQC2	676 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	SAA2-SAA4	A0A096LPE2	208 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	TRBV6-7	A0A0A0MS04	114 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	IGHV3-72	A0A0B4J1Y9	119 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	OR5H14	A6NHG9	310 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	ST8SIA5	O15466	376 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	KCNAB3	O43448	404 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	IGHG2	P01859	326 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	CSF1	P09603	554 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	SAA2	P0DJI9	122 aa	Predicted RBP	11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	RPS19	P39019	145 aa	Known RBP	11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	C9orf152	Q5JTZ5	239 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	FOXRED2	Q8IWF2	684 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	OR5AU1	Q8NGC0	362 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	CHPT1	Q8WUD6	406 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	S100A16	Q96FQ6	103 aa	Known RBP	11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	RNF5	Q99942	180 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	RASL11B	Q9BPW5	248 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	FUNDC2	Q9BWH2	189 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	GON7	Q9BXV9	100 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	RDH8	Q9NYR8	311 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	OR1A1	Q9P1Q5	309 aa		11.33	□□□□□ -0.6
SDHD-209	ENST00000640554	IGKV1-6	A0A0C4DH72	117 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	RBBP9	O75884	186 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	OPN1MW	P04001	364 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	GSTT2	P0CG29	244 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	GSTT2B	P0CG30	244 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	OPN1MW2	P0DN77	364 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	OPN1MW3	P0DN78	364 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	OR3A3	P47888	321 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	GNG2	P59768	71 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	TAGLN	Q01995	201 aa	Known RBP	11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	ZNF260	Q3ZCT1	412 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	FBLN7	Q53RD9	439 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	SLC35E3	Q7Z769	313 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	NDUFA11	Q86Y39	141 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	COMMD1	Q8N668	190 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	OR4X2	Q8NGF9	303 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	CMTM3	Q96MX0	182 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	ZNF251	Q9BRH9	671 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	MRPL20	Q9BYC9	149 aa	Known RBP	11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	MRPS26	Q9BYN8	205 aa	Known RBP	11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	ABCG5	Q9H222	651 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	PLSCR3	Q9NRY6	295 aa		11.32	□□□□□ -0.6
SDHD-209	ENST00000640554	ZNF736	B4DX44	427 aa	Predicted RBP	11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	AP4M1	O00189	453 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	BET1	O15155	118 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	GPR12	P47775	334 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	SLC35B1	P78383	322 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	CD83	Q01151	205 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	ANKRD13B	Q86YJ7	626 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554		Q8N9W7	124 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	OR5AN1	Q8NGI8	311 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	OR5H6	Q8NGV6	325 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	SLC25A46	Q96AG3	418 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	ABHD14B	Q96IU4	210 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	GINS4	Q9BRT9	223 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	ST6GALNAC5	Q9BVH7	336 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	ZNF580	Q9UK33	172 aa		11.31	□□□□□ -0.6
SDHD-209	ENST00000640554	TRAV18	A0A075B6X5	111 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	TMEM235	A6NFC5	223 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	XRCC3	O43542	346 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	SLC22A5	O76082	557 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	CT45A6	P0DMU7	189 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	CT45A5	P0DMU8	189 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	CT45A7	P0DMV0	189 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	SOX6	P35712	828 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	CBX5	P45973	191 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	ACTB	P60709	375 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	LSM3	P62310	102 aa	Known RBP	11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	IGSF11	Q5DX21	431 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	CNIH2	Q6PI25	160 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	FAM71E2	Q8N5Q1	922 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	NPB	Q8NG41	125 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	ACOT12	Q8WYK0	555 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	SLC25A38	Q96DW6	304 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	KIAA1456	Q9P272	454 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	WASHC3	Q9Y3C0	194 aa		11.3	□□□□□ -0.6
SDHD-209	ENST00000640554	PSMB11	A5LHX3	300 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	TFAP2A	P05549	437 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	OR8U9	P0C7N5	309 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	SMIM18	P0DKX4	95 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	CD28	P10747	220 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	F2RL1	P55085	397 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	MMD	Q15546	238 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	TMEM95	Q3KNT9	176 aa		11.29	□□□□□ -0.6
SDHD-209	ENST00000640554	RPL39P5	Q59GN2	51 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms