RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 EDARADDQ8WWZ3 215 aa17.25■□□□□ 0.35
NME3-210ENST00000567271 EAF1Q96JC9 268 aaPredicted RBP17.25■□□□□ 0.35
NME3-210ENST00000567271 CABLES2Q9BTV7 478 aa17.25■□□□□ 0.35
NME3-210ENST00000567271 C11orf54Q9H0W9 315 aaPredicted RBP17.25■□□□□ 0.35
NME3-210ENST00000567271 ABCG5Q9H222 651 aa17.25■□□□□ 0.35
NME3-210ENST00000567271 MOB4Q9Y3A3 225 aa17.25■□□□□ 0.35
NME3-210ENST00000567271 TRAV18A0A075B6X5 111 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 SAA2-SAA4A0A096LPE2 208 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 ZNF736B4DX44 427 aaPredicted RBP17.24■□□□□ 0.35
NME3-210ENST00000567271 DIRAS3O95661 229 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 SAA2P0DJI9 122 aaPredicted RBP17.24■□□□□ 0.35
NME3-210ENST00000567271 Q8N6K4 173 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 OR2T10Q8NGZ9 312 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 NUDCD2Q8WVJ2 157 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 KCTD12Q96CX2 325 aaKnown RBP17.24■□□□□ 0.35
NME3-210ENST00000567271 TOLLIPQ9H0E2 274 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 DCSTAMPQ9H295 470 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 GHITMQ9H3K2 345 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 DIABLOQ9NR28 239 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 PIPOXQ9P0Z9 390 aa17.24■□□□□ 0.35
NME3-210ENST00000567271 IGKV1D-8A0A087WSZ0 117 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 TRBV6-7A0A0A0MS04 114 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 RAB29O14966 203 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 BET1O15155 118 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 SSX5O60225 188 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 GNG2P59768 71 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 ABCA11PQ4W5N1 156 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 FAM71F2Q6NXP2 309 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 SGMS2Q8NHU3 365 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 ZNF251Q9BRH9 671 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 ST6GALNAC5Q9BVH7 336 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 RDH8Q9NYR8 311 aa17.23■□□□□ 0.35
NME3-210ENST00000567271 SH2D7A6NKC9 451 aaPredicted RBP17.22■□□□□ 0.35
NME3-210ENST00000567271 MOSP00540 346 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 LSAMPQ13449 338 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 UBE2NLQ5JXB2 153 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 KLHDC1Q8N7A1 406 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 SAMD12Q8N8I0 201 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 OR10J5Q8NHC4 309 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 S100A16Q96FQ6 103 aaKnown RBP17.22■□□□□ 0.35
NME3-210ENST00000567271 ABHD14BQ96IU4 210 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 S1PR3Q99500 378 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 NABP2Q9BQ15 211 aa17.22■□□□□ 0.35
NME3-210ENST00000567271 MRPL20Q9BYC9 149 aaKnown RBP17.22■□□□□ 0.35
NME3-210ENST00000567271 FGF16O43320 207 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 VSIG10L2P0DP72 767 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 RPL39P5Q59GN2 51 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 ARSJQ5FYB0 599 aaPredicted RBP17.21■□□□□ 0.35
NME3-210ENST00000567271 C5orf56Q8N8D9 126 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 RBMXL1Q96E39 390 aaKnown RBP17.21■□□□□ 0.35
NME3-210ENST00000567271 WNT10AQ9GZT5 417 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 AUNIPQ9H7T9 357 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 RNF150Q9ULK6 438 aa17.21■□□□□ 0.35
NME3-210ENST00000567271 XRCC3O43542 346 aa17.2■□□□□ 0.34
NME3-210ENST00000567271 VDAC2P45880 294 aaPredicted RBP17.2■□□□□ 0.34
NME3-210ENST00000567271 RORCP51449 518 aa17.2■□□□□ 0.34
NME3-210ENST00000567271 TMEM95Q3KNT9 176 aa17.2■□□□□ 0.34
NME3-210ENST00000567271 PLSCR3Q9NRY6 295 aa17.2■□□□□ 0.34
NME3-210ENST00000567271 CT45A6P0DMU7 189 aa17.19■□□□□ 0.34
NME3-210ENST00000567271 CT45A5P0DMU8 189 aa17.19■□□□□ 0.34
NME3-210ENST00000567271 CT45A7P0DMV0 189 aa17.19■□□□□ 0.34
NME3-210ENST00000567271 ACOT12Q8WYK0 555 aa17.19■□□□□ 0.34
NME3-210ENST00000567271 COMMD3Q9UBI1 195 aa17.19■□□□□ 0.34
NME3-210ENST00000567271 CMYA5Q8N3K9 4069 aa17.19■□□□□ 0.34
NME3-210ENST00000567271 NCBP2LA6PVI3 153 aaKnown RBP17.18■□□□□ 0.34
NME3-210ENST00000567271 PROP1O75360 226 aa17.18■□□□□ 0.34
NME3-210ENST00000567271 RPL5P46777 297 aaKnown RBP17.18■□□□□ 0.34
NME3-210ENST00000567271 C9orf152Q5JTZ5 239 aa17.18■□□□□ 0.34
NME3-210ENST00000567271 OR8H1Q8NGG4 311 aa17.18■□□□□ 0.34
NME3-210ENST00000567271 WIPF2Q8TF74 440 aaPredicted RBP17.18■□□□□ 0.34
NME3-210ENST00000567271 GINS4Q9BRT9 223 aa17.18■□□□□ 0.34
NME3-210ENST00000567271 ZNF221Q9UK13 617 aa17.18■□□□□ 0.34
NME3-210ENST00000567271 PEX14O75381 377 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 CTXN2P0C2S0 81 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 OR8U9P0C7N5 309 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 GPR12P47775 334 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 CNIH2Q6PI25 160 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 CLVS1Q8IUQ0 354 aaPredicted RBP17.17■□□□□ 0.34
NME3-210ENST00000567271 H1FOOQ8IZA3 346 aaPredicted RBP17.17■□□□□ 0.34
NME3-210ENST00000567271 Q8N9W7 124 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 OR8U1Q8NH10 309 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 CMTM3Q96MX0 182 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 ANXA10Q9UJ72 324 aa17.17■□□□□ 0.34
NME3-210ENST00000567271 EIF4EP06730 217 aaKnown RBP17.16■□□□□ 0.34
NME3-210ENST00000567271 PTHLHP12272 177 aa17.16■□□□□ 0.34
NME3-210ENST00000567271 F2RL1P55085 397 aa17.16■□□□□ 0.34
NME3-210ENST00000567271 PRR31Q5SQ13 230 aa17.16■□□□□ 0.34
NME3-210ENST00000567271 HOGA1Q86XE5 327 aa17.16■□□□□ 0.34
NME3-210ENST00000567271 RITA1Q96K30 269 aa17.16■□□□□ 0.34
NME3-210ENST00000567271 GAB2Q9UQC2 676 aa17.16■□□□□ 0.34
NME3-210ENST00000567271 APOA1P02647 267 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 ZNF182P17025 639 aaPredicted RBP17.15■□□□□ 0.34
NME3-210ENST00000567271 TAS2R20P59543 309 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 GLDNQ6ZMI3 551 aaPredicted RBP17.15■□□□□ 0.34
NME3-210ENST00000567271 GVQW1Q8N7I0 195 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 C11orf44Q8N8P7 122 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.15■□□□□ 0.34
NME3-210ENST00000567271 BEST4Q8NFU0 473 aa17.15■□□□□ 0.34
NME3-210ENST00000567271 OR5AN1Q8NGI8 311 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms