RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MSMO1Q15800 293 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 C9orf139Q6ZV77 190 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 PDZD9Q8IXQ8 264 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 OR4D10Q8NGI6 311 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 OR4P4Q8NGL7 312 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 OR8U1Q8NH10 309 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 OR56B4Q8NH76 319 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 MOB3AQ96BX8 217 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 MALSU1Q96EH3 234 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 PARP12Q9H0J9 701 aaKnown RBP10.13□□□□□ -0.79
SHMT2-221ENST00000555773 SLC2A8Q9NY64 477 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF221Q9UK13 617 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 CDC42EP3Q9UKI2 254 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 CELSR1Q9NYQ6 3014 aa10.13□□□□□ -0.79
SHMT2-221ENST00000555773 NAV3Q8IVL0 2385 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 A0A1W2PPE3 182 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 SLC31A2O15432 143 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 ST8SIA5O15466 376 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 SRP14P37108 136 aaKnown RBP10.12□□□□□ -0.79
SHMT2-221ENST00000555773 ECI1P42126 302 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 SCGB2A2Q13296 93 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 PLA1AQ53H76 456 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 C16orf87Q6PH81 154 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 LHFPL1Q86WI0 220 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 LYG1Q8N1E2 194 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-221ENST00000555773 ZBTB34Q8NCN2 500 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 OR51S1Q8NGJ8 323 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 AKR1E2Q96JD6 320 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 S1PR3Q99500 378 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 BEX2Q9BXY8 128 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 MS4A7Q9GZW8 240 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-221ENST00000555773 IFI27L2Q9H2X8 130 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 GSX1Q9H4S2 264 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-221ENST00000555773 PALMDQ9NP74 551 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 MCUBQ9NWR8 336 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 RNF150Q9ULK6 438 aa10.12□□□□□ -0.79
SHMT2-221ENST00000555773 SONP18583 2426 aaKnown RBP10.12□□□□□ -0.79
SHMT2-221ENST00000555773 IGHV3OR16-10A0A075B7F0 116 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 PLA2G10O15496 165 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 GAPDHP04406 335 aaKnown RBP10.11□□□□□ -0.79
SHMT2-221ENST00000555773 SAA4P35542 130 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 GPR12P47775 334 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-221ENST00000555773 SCGB2B2Q4G0G5 96 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 AADACL3Q5VUY0 350 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 MZT2BQ6NZ67 158 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 ST6GALNAC6Q969X2 333 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 RPEQ96AT9 228 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 ABHD14BQ96IU4 210 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 SCGB3A2Q96PL1 93 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 SLC25A21Q9BQT8 299 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-221ENST00000555773 FAM96BQ9Y3D0 163 aa10.11□□□□□ -0.79
SHMT2-221ENST00000555773 IGKV1D-13A0A0B4J2D9 117 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 OR5H14A6NHG9 310 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 LYRM1O43325 122 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 TXNL1O43396 289 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 IGKV1-13P0DP09 117 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 FXYD4P59646 89 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 DEFA1P59665 94 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 DEFA3P59666 94 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 IFITM3Q01628 133 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 ASAH1Q13510 395 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 TPTE2P1Q5T6R2 138 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 CCDC144NLQ6NUI1 221 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 FAAP20Q6NZ36 180 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 BRD3OSQ6XYD6 125 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 IDO2Q6ZQW0 420 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF833PQ6ZTB9 187 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 LHFPL4Q7Z7J7 247 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 ODF3L1Q8IXM7 274 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 SLC38A6Q8IZM9 456 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF645Q8N7E2 425 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 ZFAND1Q8TCF1 268 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 SECTM1Q8WVN6 248 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 AJUBAQ96IF1 538 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 SLC5A7Q9GZV3 580 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 OR2D2Q9H210 308 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 ZNRD1Q9P1U0 126 aa10.1□□□□□ -0.79
SHMT2-221ENST00000555773 MTORP42345 2549 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 FBP1P09467 338 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 SAA2P0DJI9 122 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-221ENST00000555773 S100GP29377 79 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 GNRHRP30968 328 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 ZNF816Q0VGE8 651 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-221ENST00000555773 SSX2Q16385 188 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 LDLRAD2Q5SZI1 272 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 RUSC1-AS1Q66K80 236 aa10.09□□□□□ -0.79
SHMT2-221ENST00000555773 LDLRAD3Q86YD5 345 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms