RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CHCHD3Q9NX63 227 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 PSORS1C1Q9UIG5 152 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 NUBP2Q9Y5Y2 271 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 IRGMA1A4Y4 181 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 EFCAB10A6NFE3 127 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 SAP30O75446 220 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 NAPSAO96009 420 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 FRMD6-AS1P0C7T7 363 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 WNT4P56705 351 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 QRFPP83859 136 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 LY6G6FQ5SQ64 297 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 CASC10Q5T4H9 136 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF880Q6PDB4 577 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 SVOPQ8N4V2 548 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 NANOGP1Q8N7R0 232 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 DRAXINQ8NBI3 349 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 ARPC1AQ92747 370 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 GALMQ96C23 342 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 MS4A10Q96PG2 267 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 RCHY1Q96PM5 261 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 CHCHD6Q9BRQ6 235 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 UQCC2Q9BRT2 126 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 OR1A1Q9P1Q5 309 aa8.9□□□□□ -0.98
PRPF40B-212ENST00000551111 DNAH1Q9P2D7 4330 aa8.9□□□□□ -0.99
PRPF40B-212ENST00000551111 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.99
PRPF40B-212ENST00000551111 H0YJW9 148 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 C3orf84H3BNL1 204 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 RRHO14718 337 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 GP9P14770 177 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 INSL3P51460 131 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 CRIP2P52943 208 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 RPS27AP62979 156 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 GABPB1Q06547 395 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 ACSM3Q53FZ2 586 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 C1orf100Q5SVJ3 147 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 TTC23Q5W5X9 447 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 ACSM6Q6P461 480 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 ZNF554Q86TJ5 538 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 ZNF429Q86V71 674 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 C10orf67Q8IYJ2 551 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 BPIFB6Q8NFQ5 453 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 OR2AK2Q8NG84 335 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 MUC7Q8TAX7 377 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 GFI1Q99684 422 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 AGMATQ9BSE5 352 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 RAB9BQ9NP90 201 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 RNF150Q9ULK6 438 aa8.89□□□□□ -0.99
PRPF40B-212ENST00000551111 TMEM14DPA8MWL7 114 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 LINC01619G3V211 115 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 SOCS1O15524 211 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 CD1AP06126 327 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 LGALS1P09382 135 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 TAS2R43P59537 309 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 ZNF660Q6AZW8 331 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 Q8N1Y9 231 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 NKAIN3Q8N8D7 197 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 LFNGQ8NES3 379 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 SETD6Q8TBK2 473 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 FBLIM1Q8WUP2 373 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 NEDD4LQ96PU5 975 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 TM2D1Q9BX74 207 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 C11orf54Q9H0W9 315 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 FKBP14Q9NWM8 211 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 CNOT2Q9NZN8 540 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 KIAA1456Q9P272 454 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 SLC23A1Q9UHI7 598 aa8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 FOXA2Q9Y261 457 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-212ENST00000551111 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 H7C2Y5 167 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 ARPC1BO15143 372 aaKnown RBP8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 RGS11O94810 467 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 IGKV1-16P04430 117 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 SCTP09683 121 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 CD37P11049 281 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 TMEM50BP56557 158 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 DEFA5Q01523 94 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 PLA2G7Q13093 441 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 PSG5Q15238 335 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 SRSF7Q16629 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 UNQ5815/PRO19632Q6UWF5 114 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 PPP1R27Q86WC6 154 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 ZNF383Q8NA42 475 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 SETD9Q8NE22 299 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 OR5AN1Q8NGI8 311 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 ABHD5Q8WTS1 349 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 RHOVQ96L33 236 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 TMEM59Q9BXS4 323 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 CST11Q9H112 138 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 LPAR5Q9H1C0 372 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 PLCXD1Q9NUJ7 323 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 AK3Q9UIJ7 227 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 LSM2Q9Y333 95 aaKnown RBP8.87□□□□□ -0.99
PRPF40B-212ENST00000551111 FOXI3A8MTJ6 420 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 737.3 ms