RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZNF429Q86V71 674 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 MND1Q9BWT6 205 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 TMEM59Q9BXS4 323 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 PIPOXQ9P0Z9 390 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 TPRKBQ9Y3C4 175 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 SMAD5-AS1Q9Y6J3 95 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 DNAH7Q8WXX0 4024 aa15.27■□□□□ 0.03
TNFRSF1B-204ENST00000536782 OVOL1O14753 267 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ST8SIA5O15466 376 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 INSL4Q14641 139 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ECSCRQ19T08 205 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 FAM27D1Q5T7N8 215 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ZNF660Q6AZW8 331 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 FAM131AQ6UXB0 335 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 IZUMO2Q6UXV1 221 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 MS4A15Q8N5U1 240 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 KCNG3Q8TAE7 436 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 DCUN1D4Q92564 292 aa15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CHMP1AQ9HD42 196 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1B-204ENST00000536782 A0A1W2PN81 502 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 PTGES3LE9PB15 166 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RAB29O14966 203 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ATP6V1G2O95670 118 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 HTR2CP28335 458 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CHRNA7P36544 502 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 PLGLAQ15195 96 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RBM48Q5RL73 367 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 C1orf100Q5SVJ3 147 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 LRRTM1Q86UE6 522 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SVOPQ8N4V2 548 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 PHYHIPQ92561 330 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 FBXL15Q9H469 300 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ISYNA1Q9NPH2 558 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SLC23A1Q9UHI7 598 aa15.25■□□□□ 0.03
TNFRSF1B-204ENST00000536782 OR5H14A6NHG9 310 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RRHO14718 337 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SAP30O75446 220 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 NAPSAO96009 420 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CT45A6P0DMU7 189 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CT45A5P0DMU8 189 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CT45A7P0DMV0 189 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 MC5RP33032 325 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CRIP2P52943 208 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CX3CL1P78423 397 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 NDPQ00604 133 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RPL39P5Q59GN2 51 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 C19orf54Q5BKX5 351 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TCTEX1D1Q8N7M0 179 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SETD6Q8TBK2 473 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 NICN1Q9BSH3 213 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ALX4Q9H161 411 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 DUSP21Q9H596 190 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 PLEKHJ1Q9NW61 149 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 FOXA2Q9Y261 457 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 FBXO7Q9Y3I1 522 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RYR2Q92736 4967 aa15.24■□□□□ 0.03
TNFRSF1B-204ENST00000536782 LINC01619G3V211 115 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 C3orf84H3BNL1 204 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SOX15O60248 233 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TMEM267Q0VDI3 215 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 UNC119Q13432 240 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 IRF3Q14653 427 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ZNF880Q6PDB4 577 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 GLDNQ6ZMI3 551 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 MOB1BQ7L9L4 216 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ABHD5Q8WTS1 349 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 DLX4Q92988 240 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TMED9Q9BVK6 235 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TOLLIPQ9H0E2 274 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 GHITMQ9H3K2 345 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RAB26Q9ULW5 256 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 LSM2Q9Y333 95 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 A3GALT2U3KPV4 340 aa15.23■□□□□ 0.03
TNFRSF1B-204ENST00000536782 H7C2Y5 167 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RBBP9O75884 186 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 GSTP1P09211 210 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 LGALS1P09382 135 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SRMP19623 302 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SPHARQ15513 63 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CASTOR1Q8WTX7 329 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ABHD14BQ96IU4 210 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RIMS4Q9H426 269 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 KCNK15Q9H427 330 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RNF150Q9ULK6 438 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 WASHC3Q9Y3C0 194 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 NUBP2Q9Y5Y2 271 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SACSQ9NZJ4 4579 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TENM2Q9NT68 2774 aa15.22■□□□□ 0.03
TNFRSF1B-204ENST00000536782 TMEM14DPA8MWL7 114 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 H0YJW9 148 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 FCN1O00602 326 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 ITGB1BP1O14713 200 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SLC22A1O15245 554 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 RGS10O43665 173 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 CRHBPP24387 322 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 SLURP1P55000 103 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 QRFPP83859 136 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 HSD17B12Q53GQ0 312 aa15.21■□□□□ 0.03
TNFRSF1B-204ENST00000536782 PYHIN1Q6K0P9 492 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms