RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 MMDQ15546 238 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 NEDD8Q15843 81 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 LY6G6FQ5SQ64 297 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 CHPT1Q8WUD6 406 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 FCGR1BQ92637 280 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 OR51E2Q9H255 320 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 RIMS4Q9H426 269 aaPredicted RBP12.48□□□□□ -0.41
GABPA-203ENST00000487266 RNF167Q9H6Y7 350 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 STUB1Q9UNE7 303 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 LRRC42Q9Y546 428 aa12.48□□□□□ -0.41
GABPA-203ENST00000487266 RAB27BO00194 218 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 MFNGO00587 321 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 PF4P02776 101 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 IGLL1P15814 213 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 CEACAM6P40199 344 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 RPL23AP62750 156 aaKnown RBP12.47□□□□□ -0.41
GABPA-203ENST00000487266 KPRPQ5T749 579 aaPredicted RBP12.47□□□□□ -0.41
GABPA-203ENST00000487266 FAM131AQ6UXB0 335 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 OR10R2Q8NGX6 335 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 RAB3CQ96E17 227 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 AGMATQ9BSE5 352 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 C11orf54Q9H0W9 315 aaPredicted RBP12.47□□□□□ -0.41
GABPA-203ENST00000487266 ZNF230Q9UIE0 474 aaPredicted RBP12.47□□□□□ -0.41
GABPA-203ENST00000487266 ELF5Q9UKW6 265 aaPredicted RBP12.47□□□□□ -0.41
GABPA-203ENST00000487266 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
GABPA-203ENST00000487266 AP4M1O00189 453 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 HSPA12AO43301 675 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 FCGR3AP08637 254 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 CT45A6P0DMU7 189 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 CT45A5P0DMU8 189 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 CT45A7P0DMV0 189 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 SNRPBP14678 240 aaKnown RBP12.46□□□□□ -0.41
GABPA-203ENST00000487266 CD33P20138 364 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 GALP22466 123 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 ZBTB25P24278 435 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 FGF9P31371 208 aaPredicted RBP12.46□□□□□ -0.41
GABPA-203ENST00000487266 SOX6P35712 828 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 LINC00205P59089 165 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 C8orf86Q6ZUL3 223 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 DUX3Q96PT4 197 aa12.46□□□□□ -0.41
GABPA-203ENST00000487266 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
GABPA-203ENST00000487266 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 RAB29O14966 203 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 CLEC2LP0C7M8 214 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 HIST1H1DP16402 221 aaKnown RBP12.45□□□□□ -0.42
GABPA-203ENST00000487266 RAB6AP20340 208 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 SLC35B1P78383 322 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 IGSF11Q5DX21 431 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 DRAXINQ8NBI3 349 aaPredicted RBP12.45□□□□□ -0.42
GABPA-203ENST00000487266 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 OR8H1Q8NGG4 311 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 PHF21AQ96BD5 680 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 CHCHD6Q9BRQ6 235 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 RDH8Q9NYR8 311 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 PIPOXQ9P0Z9 390 aa12.45□□□□□ -0.42
GABPA-203ENST00000487266 ZNF107Q9UII5 783 aaPredicted RBP12.45□□□□□ -0.42
GABPA-203ENST00000487266 TGP01266 2768 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 IGKV1D-8A0A087WSZ0 117 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 NOTOA8MTQ0 251 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 NUDT19A8MXV4 375 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 NBR2O15453 112 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 FABP7O15540 132 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 PROP1O75360 226 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 RPLP1P05386 114 aaKnown RBP12.44□□□□□ -0.42
GABPA-203ENST00000487266 GSTT2P0CG29 244 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 GSTT2BP0CG30 244 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 GADD45AP24522 165 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 MRPS15P82914 257 aaKnown RBP12.44□□□□□ -0.42
GABPA-203ENST00000487266 CFHR3Q02985 330 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 MXD1Q05195 221 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 FAM71F2Q6NXP2 309 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 LGALS14Q8TCE9 139 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 MGAT4AQ9UM21 535 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 SSR3Q9UNL2 185 aa12.44□□□□□ -0.42
GABPA-203ENST00000487266 LOC100506127A0A0U1RQW1 187 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 G3V318 75 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 H0YJW9 148 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 BET1O15155 118 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 SDC2P34741 201 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 NDPQ00604 133 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 KCTD21Q4G0X4 260 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 LINC00482Q8N8I6 264 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 EDARADDQ8WWZ3 215 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 C5orf30Q96GV9 206 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 CENPOQ9BU64 300 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
GABPA-203ENST00000487266 IGHV7-81A0A0B4J1V7 117 aa12.42□□□□□ -0.42
GABPA-203ENST00000487266 ATP6V0E1O15342 81 aa12.42□□□□□ -0.42
GABPA-203ENST00000487266 VDAC1P21796 283 aa12.42□□□□□ -0.42
GABPA-203ENST00000487266 TGFBR1P36897 503 aa12.42□□□□□ -0.42
GABPA-203ENST00000487266 ARFRP1Q13795 201 aa12.42□□□□□ -0.42
GABPA-203ENST00000487266 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms