RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FUNDC2Q9BWH2 189 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 PIPOXQ9P0Z9 390 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 ZNF230Q9UIE0 474 aaPredicted RBP10.26□□□□□ -0.77
COL5A1-206ENST00000465877 MEGF8Q7Z7M0 2845 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 WNK1Q9H4A3 2382 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 TMEM127O75204 238 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 TSPAN15O95858 294 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 MOSP00540 346 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 GSTP1P09211 210 aaKnown RBP10.25□□□□□ -0.77
COL5A1-206ENST00000465877 TALDO1P37837 337 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 CEACAM6P40199 344 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 NCS1P62166 190 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 Q6ZS49 121 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 CROCCP3Q8IVE0 287 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 NUDCD2Q8WVJ2 157 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 RBMXL1Q96E39 390 aaKnown RBP10.25□□□□□ -0.77
COL5A1-206ENST00000465877 ABHD14BQ96IU4 210 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 ZNF251Q9BRH9 671 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 MRPS26Q9BYN8 205 aaKnown RBP10.25□□□□□ -0.77
COL5A1-206ENST00000465877 RDH8Q9NYR8 311 aa10.25□□□□□ -0.77
COL5A1-206ENST00000465877 RAB29O14966 203 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 BET1O15155 118 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 DIRAS3O95661 229 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 GSTT2P0CG29 244 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 GSTT2BP0CG30 244 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 DTYMKP23919 212 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 RPS19P39019 145 aaKnown RBP10.24□□□□□ -0.77
COL5A1-206ENST00000465877 SERPINB10P48595 397 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 GNG2P59768 71 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 ZNF260Q3ZCT1 412 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 CDNFQ49AH0 187 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 RPL39P5Q59GN2 51 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 IGSF11Q5DX21 431 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 HACD4Q5VWC8 232 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 TREML4Q6UXN2 200 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 PHF21AQ96BD5 680 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 S1PR3Q99500 378 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 AGMATQ9BSE5 352 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 C11orf54Q9H0W9 315 aaPredicted RBP10.24□□□□□ -0.77
COL5A1-206ENST00000465877 SPATA2Q9UM82 520 aa10.24□□□□□ -0.77
COL5A1-206ENST00000465877 IGKV1D-8A0A087WSZ0 117 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 TRBV6-7A0A0A0MS04 114 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 A0A0A6YYH2 397 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 A6NJ64 397 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 NCBP2LA6PVI3 153 aaKnown RBP10.23□□□□□ -0.77
COL5A1-206ENST00000465877 GABARAPO95166 117 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 CD28P10747 220 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 VBP1P61758 197 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 PITPNAQ00169 270 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 SRSF7Q16629 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL5A1-206ENST00000465877 PNLIPRP3Q17RR3 467 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 UBE2NLQ5JXB2 153 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 FAM131AQ6UXB0 335 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 FAM71E2Q8N5Q1 922 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 Q8N9W7 124 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 OR8H1Q8NGG4 311 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 OR10J5Q8NHC4 309 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 SLC25A46Q96AG3 418 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 TOLLIPQ9H0E2 274 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 MMP27Q9H306 513 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 GHITMQ9H3K2 345 aa10.23□□□□□ -0.77
COL5A1-206ENST00000465877 LIN7CQ9NUP9 197 aaKnown RBP10.23□□□□□ -0.77
COL5A1-206ENST00000465877 OR5H14A6NHG9 310 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 SSX5O60225 188 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 IGHG2P01859 326 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 GPR12P47775 334 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 MMDQ15546 238 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 SLC35E3Q7Z769 313 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 GINS4Q9BRT9 223 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 NAA50Q9GZZ1 169 aaKnown RBP10.22□□□□□ -0.77
COL5A1-206ENST00000465877 OR2D2Q9H210 308 aa10.22□□□□□ -0.77
COL5A1-206ENST00000465877 TRAV18A0A075B6X5 111 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 H0YJW9 148 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 CSF1P09603 554 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 F2RL1P55085 397 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 ACTBP60709 375 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 C10orf99Q6UWK7 81 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 GLDNQ6ZMI3 551 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-206ENST00000465877 ANKRD13BQ86YJ7 626 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 SAMD12Q8N8I0 201 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-206ENST00000465877 OR5AU1Q8NGC0 362 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-206ENST00000465877 ABCG5Q9H222 651 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 DCSTAMPQ9H295 470 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 PLSCR3Q9NRY6 295 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 ZNF221Q9UK13 617 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 RNF150Q9ULK6 438 aa10.21□□□□□ -0.77
COL5A1-206ENST00000465877 KCNAB3O43448 404 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 CNTFRP26992 372 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 ALDH3B2P48448 385 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 CTF1Q16619 201 aa10.2□□□□□ -0.78
COL5A1-206ENST00000465877 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms