RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZNF250P15622 560 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 RPS2P15880 293 aaKnown RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 M6PRP20645 277 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 FUT3P21217 361 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CCNOP22674 350 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CD82P27701 267 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 OPRM1P35372 400 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 APLNRP35414 380 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SUPT4H1P63272 117 aaKnown RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARG2P78540 354 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 BAMBIQ13145 260 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PRDX4Q13162 271 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 IL15RAQ13261 267 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ATXN7L3Q14CW9 347 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ANKRD55Q3KP44 614 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PIGYQ3MUY2 71 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ABCA11PQ4W5N1 156 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PHLDA2Q53GA4 152 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 C9orf135Q5VTT2 229 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 FBXW9Q5XUX1 488 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ELP2Q6IA86 826 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC35E4Q6ICL7 350 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PRSS54Q6PEW0 395 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SIGLEC15Q6ZMC9 328 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC25A26Q70HW3 274 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 MRPL21Q7Z2W9 205 aaKnown RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 NUFIP2Q7Z417 695 aaKnown RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 HSD17B13Q7Z5P4 300 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 MKXQ8IYA7 352 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZFP62Q8NB50 900 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM178AQ8NBL3 297 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR10AD1Q8NGE0 317 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5L1Q8NGL2 311 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR1K1Q8NGR3 316 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 FNDC9Q8TBE3 224 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 DCUN1D4Q92564 292 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PHYHIPLQ96FC7 376 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PIK3IP1Q96FE7 263 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CYYR1Q96J86 154 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR10C1Q96KK4 312 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 POM121L2Q96KW2 1035 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CXorf58Q96LI9 332 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SGK494Q96LW2 274 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SULT4A1Q9BR01 284 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 HDHD3Q9BSH5 251 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 RNF126Q9BV68 326 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF471Q9BX82 626 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 REG4Q9BYZ8 158 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CSTL1Q9H114 145 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 DNTTIP1Q9H147 329 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF442Q9H7R0 627 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF286AQ9HBT8 521 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 SDHAF2Q9NX18 166 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 RASL12Q9NYN1 266 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 MBD2Q9UBB5 411 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 NUP50Q9UKX7 468 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 STARD10Q9Y365 291 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF175Q9Y473 711 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CSAG2Q9Y5P2 127 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PCNX3Q9H6A9 2034 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 UNC13CQ8NB66 2214 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 BRWD1Q9NSI6 2320 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CRYM-AS1A6NIL9 109 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC22A20A6NK97 555 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ANKRD30BLA7E2S9 258 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CD300LBA8K4G0 201 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 A8MXK9 166 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF732B4DXR9 585 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRDCB7Z8K6 153 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRAPPC2LH3BP13 241 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 TAAR5O14804 337 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 FGF16O43320 207 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SS18L1O75177 396 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 DIRAS3O95661 229 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 NGFP01138 241 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GLAP06280 429 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SFTPBP07988 381 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 FCGR3AP08637 254 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CTXN2P0C2S0 81 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 PAX1P15863 534 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 BCL3P20749 454 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZP3P21754 424 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 IL32P24001 234 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 FCGR2CP31995 323 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GLP1RP43220 463 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 HAAOP46952 286 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CCL11P51671 97 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GPM6AP51674 278 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 RBM11P57052 281 aaKnown RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 PIGPP57054 158 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 FGF12P61328 243 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 EIF5AP63241 154 aaKnown RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 NAAAQ02083 359 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SMCO1Q147U7 214 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 TGIF1Q15583 401 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 C3AR1Q16581 482 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 IAH1Q2TAA2 248 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CEACAM21Q3KPI0 293 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM30BQ3MIR4 351 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms