RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ACER3Q9NUN7 267 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ASB6Q9NWX5 421 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 GNG8Q9UK08 70 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 FBN2P35556 2912 aa3.84□□□□□ -1.8
SF3B1-202ENST00000409915 CELSR2Q9HCU4 2923 aa3.84□□□□□ -1.8
SF3B1-202ENST00000409915 HEATR5AQ86XA9 2040 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 A0A087WWC5 75 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 TMED7-TICAM2A0A0A6YYA0 188 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 KBTBD11-OT1A0A1B0GTJ5 212 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1B0GWA3 101 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1W2PNV4 684 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 C20orf202A1L168 122 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 LRP5LA4QPB2 252 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ARRDC5A6NEK1 342 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF814B7Z6K7 855 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OVOL3O00110 214 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ETV2O00321 342 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-202ENST00000409915 GNGT2O14610 69 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 SH2D1BO14796 132 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 PHOX2AO14813 284 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CCL25O15444 150 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MAGEB4O15481 346 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MLNRO43193 412 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 RAMP1O60894 148 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MMP23AO75900 390 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CLDN14O95500 239 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 HPRT1P00492 218 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CD74P04233 296 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 H1F0P07305 194 aaKnown RBP3.83□□□□□ -1.8
SF3B1-202ENST00000409915 PSMB1P20618 241 aaKnown RBP3.83□□□□□ -1.8
SF3B1-202ENST00000409915 PRKACGP22612 351 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 GLRA1P23415 457 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 EDNRAP25101 427 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 EPHA2P29317 976 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 GNRHRP30968 328 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CFHR2P36980 270 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 P2RY1P47900 373 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 PDLIM4P50479 330 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CRISP1P54107 249 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MXD1Q05195 221 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 TFF3Q07654 80 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 RBBP4Q09028 425 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 PRDX4Q13162 271 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MEF2DQ14814 521 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 HERPUD1Q15011 391 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 VMACQ2NL98 169 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MORN2Q502X0 79 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR10K2Q6IF99 312 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF562Q6V9R5 426 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 Q6ZTK2 550 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MOB3BQ86TA1 216 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 LYG1Q8N1E2 194 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 GBGT1Q8N5D6 347 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ARIH2OSQ8N7S6 290 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 SAMD12Q8N8I0 201 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CNEP1R1Q8N9A8 125 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 LRRC75AQ8NAA5 344 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR2T12Q8NG77 320 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR4S1Q8NGB4 309 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR4F15Q8NGB8 312 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR4D11Q8NGI4 311 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR1J1Q8NGS3 322 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR13C5Q8NGS8 318 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 OR10R2Q8NGX6 335 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 LYPD6BQ8NI32 183 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 NPRL2Q8WTW4 380 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ABHD3Q8WU67 409 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 THEM6Q8WUY1 208 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 NUDCD2Q8WVJ2 157 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM234Q8WY98 164 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 C11orf40Q8WZ69 217 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 FBXO17Q96EF6 278 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 TIMD4Q96H15 378 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 HIST1H2BLQ99880 126 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 SLITRK2Q9H156 845 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ADGRL4Q9HBW9 690 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 SLC17A5Q9NRA2 495 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 INPP5EQ9NRR6 644 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF319Q9P2F9 582 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CLN8Q9UBY8 286 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 KCNG2Q9UJ96 466 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 MCTS1Q9ULC4 181 aaKnown RBP3.83□□□□□ -1.8
SF3B1-202ENST00000409915 HDGFL3Q9Y3E1 203 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CACNA1CQ13936 2221 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 UNC79Q9P2D8 2635 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 CENPEQ02224 2701 aa3.83□□□□□ -1.8
SF3B1-202ENST00000409915 DOCK7Q96N67 2140 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 PHF3Q92576 2039 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 IGKV1D-42A0A075B6H8 117 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 IGHV2-70DA0A0C4DH43 119 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 A0A1B0GW64 132 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 PRSS37A4D1T9 235 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 CPSF4LA6NMK7 179 aaKnown RBP3.82□□□□□ -1.8
SF3B1-202ENST00000409915 LINC00473A8K010 186 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
SF3B1-202ENST00000409915 PRR32B1ATL7 298 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms