RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ZNF230Q9UIE0 474 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-204ENST00000405692 ANK2Q01484 3957 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 SAA2-SAA4A0A096LPE2 208 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 SAA2P0DJI9 122 aaPredicted RBP16.6■□□□□ 0.25
PDGFA-204ENST00000405692 VSIG10L2P0DP72 767 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 UBE2NLQ5JXB2 153 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 TOLLIPQ9H0E2 274 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 C11orf54Q9H0W9 315 aaPredicted RBP16.6■□□□□ 0.25
PDGFA-204ENST00000405692 ABCG5Q9H222 651 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 SERTAD4Q9NUC0 356 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 RDH8Q9NYR8 311 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 ZNF221Q9UK13 617 aa16.6■□□□□ 0.25
PDGFA-204ENST00000405692 TRAV18A0A075B6X5 111 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 IGKV1-6A0A0C4DH72 117 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 TMEM235A6NFC5 223 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 BET1O15155 118 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 GABARAPO95166 117 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 CTXN2P0C2S0 81 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 GSTT2P0CG29 244 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 GSTT2BP0CG30 244 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 KRTAP10-3P60369 221 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 SRSF4Q08170 494 aaKnown RBP16.59■□□□□ 0.25
PDGFA-204ENST00000405692 LSAMPQ13449 338 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 GINS4Q9BRT9 223 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 ST6GALNAC5Q9BVH7 336 aa16.59■□□□□ 0.25
PDGFA-204ENST00000405692 TRBV6-7A0A0A0MS04 114 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 NCBP2LA6PVI3 153 aaKnown RBP16.58■□□□□ 0.24
PDGFA-204ENST00000405692 M0QZ24 198 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 OR3A3P47888 321 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 ALDH3B2P48448 385 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 FBLN7Q53RD9 439 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 IGSF11Q5DX21 431 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 C9orf152Q5JTZ5 239 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 GPR107Q5VW38 600 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 Q8N6K4 173 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 C5orf56Q8N8D9 126 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 ACOT12Q8WYK0 555 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 MAFIPQ8WZ33 124 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 NABP2Q9BQ15 211 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 AGMATQ9BSE5 352 aa16.58■□□□□ 0.24
PDGFA-204ENST00000405692 MRPL20Q9BYC9 149 aaKnown RBP16.58■□□□□ 0.24
PDGFA-204ENST00000405692 ELF5Q9UKW6 265 aaPredicted RBP16.58■□□□□ 0.24
PDGFA-204ENST00000405692 AMY1AP04745 511 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 AMY2AP04746 511 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 TFAP2AP05549 437 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 GPR12P47775 334 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 RORCP51449 518 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 Q6ZS46 218 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 SAMD12Q8N8I0 201 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 NUDCD2Q8WVJ2 157 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 ABHD14BQ96IU4 210 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 CMTM3Q96MX0 182 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 WNT10AQ9GZT5 417 aa16.57■□□□□ 0.24
PDGFA-204ENST00000405692 ZNF736B4DX44 427 aaPredicted RBP16.56■□□□□ 0.24
PDGFA-204ENST00000405692 XRCC3O43542 346 aa16.56■□□□□ 0.24
PDGFA-204ENST00000405692 MC5RP33032 325 aa16.56■□□□□ 0.24
PDGFA-204ENST00000405692 PRR31Q5SQ13 230 aa16.56■□□□□ 0.24
PDGFA-204ENST00000405692 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.56■□□□□ 0.24
PDGFA-204ENST00000405692 RASL11BQ9BPW5 248 aa16.56■□□□□ 0.24
PDGFA-204ENST00000405692 PARP12Q9H0J9 701 aaKnown RBP16.56■□□□□ 0.24
PDGFA-204ENST00000405692 LIN7CQ9NUP9 197 aaKnown RBP16.56■□□□□ 0.24
PDGFA-204ENST00000405692 RBM7Q9Y580 266 aaKnown RBP16.56■□□□□ 0.24
PDGFA-204ENST00000405692 OR5H14A6NHG9 310 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 CBX5P45973 191 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 CTF1Q16619 201 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 RPL39P5Q59GN2 51 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 CNIH2Q6PI25 160 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 AP3S1Q92572 193 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 ZNF251Q9BRH9 671 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 NAA50Q9GZZ1 169 aaKnown RBP16.55■□□□□ 0.24
PDGFA-204ENST00000405692 AUNIPQ9H7T9 357 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 RNF150Q9ULK6 438 aa16.55■□□□□ 0.24
PDGFA-204ENST00000405692 FBXO24O75426 580 aa16.54■□□□□ 0.24
PDGFA-204ENST00000405692 MZT2AQ6P582 158 aa16.54■□□□□ 0.24
PDGFA-204ENST00000405692 CENPVQ7Z7K6 275 aaPredicted RBP16.54■□□□□ 0.24
PDGFA-204ENST00000405692 COMMD3Q9UBI1 195 aa16.54■□□□□ 0.24
PDGFA-204ENST00000405692 ANXA10Q9UJ72 324 aa16.54■□□□□ 0.24
PDGFA-204ENST00000405692 GAB2Q9UQC2 676 aa16.54■□□□□ 0.24
PDGFA-204ENST00000405692 SMIM31A0A1B0GVY4 71 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 SH2D7A6NKC9 451 aaPredicted RBP16.53■□□□□ 0.24
PDGFA-204ENST00000405692 SSX5O60225 188 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 OR8U9P0C7N5 309 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 CT45A6P0DMU7 189 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 CT45A5P0DMU8 189 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 CT45A7P0DMV0 189 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 RPL5P46777 297 aaKnown RBP16.53■□□□□ 0.24
PDGFA-204ENST00000405692 MMDQ15546 238 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 C2orf68Q2NKX9 166 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 TMEM95Q3KNT9 176 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 TMEM69Q5SWH9 247 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 SLC35E3Q7Z769 313 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 FOXRED2Q8IWF2 684 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 H1FOOQ8IZA3 346 aaPredicted RBP16.53■□□□□ 0.24
PDGFA-204ENST00000405692 Q8N9W7 124 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 OR8U1Q8NH10 309 aa16.53■□□□□ 0.24
PDGFA-204ENST00000405692 IGKV1D-8A0A087WSZ0 117 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 KCNAB3O43448 404 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 RBBP9O75884 186 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 IGHG2P01859 326 aa16.52■□□□□ 0.24
PDGFA-204ENST00000405692 APOA1P02647 267 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms