RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 Q8IYB0 196 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 CYB561D1Q8N8Q1 229 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 WDR31Q8NA23 367 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BHQ93079 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BNQ99877 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BMQ99879 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 PRDM13Q9H4Q3 707 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 RNF224P0DH78 156 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 RUNX1Q01196 453 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 DEFA6Q01524 100 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 SLC25A31Q9H0C2 315 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 RNF150Q9ULK6 438 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 HAND1O96004 215 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 TRGC2P03986 189 aa20.03■□□□□ 0.8
PABPN1-202ENST00000397276 OPN3Q9H1Y3 402 aaPredicted RBP20.03■□□□□ 0.8
PABPN1-202ENST00000397276 IGKV1-39P01597 117 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 IGKV1D-39P04432 117 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 MDH2P40926 338 aaKnown RBP20.02■□□□□ 0.8
PABPN1-202ENST00000397276 ZNF266Q14584 549 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 ZNF610Q8N9Z0 462 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 CLEC18AA5D8T8 446 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 J3QW42 95 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 CYB5BO43169 146 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 SRP19P09132 144 aaKnown RBP20.02■□□□□ 0.8
PABPN1-202ENST00000397276 ZNF146Q15072 292 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 GUSBP1Q15486 140 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 CLEC18CQ8NCF0 446 aa20.02■□□□□ 0.8
PABPN1-202ENST00000397276 PAX9P55771 341 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 AESQ08117 197 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 ZNF429Q86V71 674 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 SARAFQ96BY9 339 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 TAAR6Q96RI8 345 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 DUXBA0A1W2PPF3 345 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 TIMM8AO60220 97 aaPredicted RBP20.01■□□□□ 0.79
PABPN1-202ENST00000397276 IGKV3-15P01624 115 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 CECR9P0C854 216 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 TPRX1Q8N7U7 411 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 RNF115Q9Y4L5 304 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 CACNA1DQ01668 2161 aa20.01■□□□□ 0.79
PABPN1-202ENST00000397276 A0A1B0GV90 55 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 AQP7O14520 342 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 PITX3O75364 302 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 TMEM267Q0VDI3 215 aaPredicted RBP20■□□□□ 0.79
PABPN1-202ENST00000397276 C14orf144Q96I85 54 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 CACNG5Q9UF02 275 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20■□□□□ 0.79
PABPN1-202ENST00000397276 C4orf17Q53FE4 359 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 IGFL2Q6UWQ7 119 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 OR8G5Q8NG78 346 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 OR1L1Q8NH94 360 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 PRO1933Q9H354 126 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 IAPPP10997 89 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 OR3A1P47881 315 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 GAMTQ14353 236 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 C11orf53Q8IXP5 236 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 LFNGQ8NES3 379 aa20■□□□□ 0.79
PABPN1-202ENST00000397276 ICAM4Q14773 271 aa19.99■□□□□ 0.79
PABPN1-202ENST00000397276 IL22RA2Q969J5 263 aa19.99■□□□□ 0.79
PABPN1-202ENST00000397276 DIDO1Q9BTC0 2240 aaKnown RBP19.99■□□□□ 0.79
PABPN1-202ENST00000397276 KHDC3LQ587J8 217 aa19.99■□□□□ 0.79
PABPN1-202ENST00000397276 Q6ZR03 302 aa19.99■□□□□ 0.79
PABPN1-202ENST00000397276 PRR33A8MZF0 331 aa19.98■□□□□ 0.79
PABPN1-202ENST00000397276 ACSF3Q4G176 576 aaPredicted RBP19.98■□□□□ 0.79
PABPN1-202ENST00000397276 MOB1BQ7L9L4 216 aa19.98■□□□□ 0.79
PABPN1-202ENST00000397276 S100PBPQ96BU1 408 aa19.98■□□□□ 0.79
PABPN1-202ENST00000397276 MEGF10Q96KG7 1140 aa19.98■□□□□ 0.79
PABPN1-202ENST00000397276 A0A1B0GW64 132 aa19.98■□□□□ 0.79
PABPN1-202ENST00000397276 MDKP21741 143 aaPredicted RBP19.98■□□□□ 0.79
PABPN1-202ENST00000397276 DRAM1Q8N682 238 aa19.98■□□□□ 0.79
PABPN1-202ENST00000397276 MBNL3Q9NUK0 354 aaKnown RBP19.98■□□□□ 0.79
PABPN1-202ENST00000397276 INTS1Q8N201 2190 aaKnown RBP19.97■□□□□ 0.79
PABPN1-202ENST00000397276 IGKV1-5P01602 117 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 COX5AP20674 150 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 ZNF585BQ52M93 769 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 ABHD5Q8WTS1 349 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 DKK4Q9UBT3 224 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 METRNQ9UJH8 293 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 SCAF4O95104 1147 aaKnown RBP19.97■□□□□ 0.79
PABPN1-202ENST00000397276 GABRA2P47869 451 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 ZNF808Q8N4W9 903 aaPredicted RBP19.97■□□□□ 0.79
PABPN1-202ENST00000397276 OR52L2PQ8NGH6 319 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 WIPI2Q9Y4P8 454 aa19.97■□□□□ 0.79
PABPN1-202ENST00000397276 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.96■□□□□ 0.79
PABPN1-202ENST00000397276 A0A1B0GU03 582 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 FABP4P15090 132 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 FIP1L1Q6UN15 594 aaKnown RBP19.96■□□□□ 0.79
PABPN1-202ENST00000397276 ZNF295-AS1Q8N0V1 137 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 HIST3H2BBQ8N257 126 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 MRGPRDQ8TDS7 321 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 KCNIP1Q9NZI2 227 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 WSB1Q9Y6I7 421 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 TMEM210A6NLX4 147 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 NPIPB11E5RHQ5 1161 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 DMRTC2Q8IXT2 367 aaPredicted RBP19.96■□□□□ 0.79
PABPN1-202ENST00000397276 FRZBQ92765 325 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 ABHD14BQ96IU4 210 aa19.96■□□□□ 0.79
PABPN1-202ENST00000397276 RIF1Q5UIP0 2472 aaKnown RBP19.96■□□□□ 0.79
PABPN1-202ENST00000397276 C12orf77C9JDV5 145 aa19.95■□□□□ 0.78
PABPN1-202ENST00000397276 PTBP3O95758 552 aaKnown RBP19.95■□□□□ 0.78
PABPN1-202ENST00000397276 STARD4Q96DR4 205 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms