RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MIEN1Q9BRT3 115 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 MRPL22Q9NWU5 206 aaKnown RBP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 UBE2L6O14933 153 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 MELTFP08582 738 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ZNF708P17019 499 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ZP3P21754 424 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 CLDN18P56856 261 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 C11orf42Q8N5U0 333 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 NECAP1Q8NC96 275 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ADAD2Q8NCV1 583 aaKnown RBP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM106BQ9NUM4 274 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 KNTC1P50748 2209 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 PRSS1P07477 247 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 RD3LP0DJH9 198 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 CD40P25942 277 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 MAS1LP35410 378 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM50BP56557 158 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ZNF146Q15072 292 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 PSMG4Q5JS54 123 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 OTPQ5XKR4 325 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 FDCSPQ8NFU4 85 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 MRGPRFQ96AM1 343 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 RBM14Q96PK6 669 aaKnown RBP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 PLAC1Q9HBJ0 212 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 KCNK7Q9Y2U2 307 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ECM29Q5VYK3 1845 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 KBTBD11O94819 623 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 SULT1A2P50226 295 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 CD81P60033 236 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 EWSR1Q01844 656 aaKnown RBP eCLIP6.17□□□□□ -1.42
CCDC171-201ENST00000380701 ELOBQ15370 118 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 TEX261Q6UWH6 196 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 PRSS27Q9BQR3 290 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 CBLN4Q9NTU7 201 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 OPN4Q9UHM6 478 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 MOB4Q9Y3A3 225 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 LY75O60449 1722 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 IGKV1D-16P01601 117 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 CD5P06127 495 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM183BQ1AE95 376 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 SLC25A53Q5H9E4 307 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 CDCP2Q5VXM1 449 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 XAF1Q6GPH4 301 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 C19orf48Q6RUI8 117 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 FOXJ2Q9P0K8 574 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 PRSS50Q9UI38 385 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 MRPS18BQ9Y676 258 aaKnown RBP6.17□□□□□ -1.42
CCDC171-201ENST00000380701 ANKRD12Q6UB98 2062 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 IGHV3OR15-7A0A075B7D8 119 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 IGKV3D-11A0A0A0MRZ8 115 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 IGKV1-8A0A0C4DH67 115 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 GHRHP01286 108 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 KRTDAPP60985 99 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 SAPCD1Q5SSQ6 148 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 FAM210BQ96KR6 192 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 GPR82Q96P67 336 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 MRPL37Q9BZE1 423 aaKnown RBP6.17□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM222Q9H0R3 208 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 FAM157CP0CG43 387 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 ADAT3Q96EY9 351 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-201ENST00000380701 SSBP3Q9BWW4 388 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-201ENST00000380701 TMPRSS13Q9BYE2 586 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 DTX4Q9Y2E6 619 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM189A5PLL7 270 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 ADAP1O75689 374 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 GZMMP51124 257 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 MEGF10Q96KG7 1140 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 FAM103A1Q9BTL3 118 aaKnown RBP6.17□□□□□ -1.42
CCDC171-201ENST00000380701 GGACTQ9BVM4 153 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 MAP1LC3CQ9BXW4 147 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 METRNQ9UJH8 293 aa6.17□□□□□ -1.42
CCDC171-201ENST00000380701 HNRNPA3P51991 378 aaKnown RBP6.16□□□□□ -1.42
CCDC171-201ENST00000380701 PIGYQ3MUY2 71 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 WDR25Q64LD2 544 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-201ENST00000380701 MRPL14Q6P1L8 145 aaKnown RBP6.16□□□□□ -1.42
CCDC171-201ENST00000380701 SLC16A13Q7RTY0 426 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TNFRSF14Q92956 283 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 ABHD17AQ96GS6 310 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 IQCF6A8MYZ5 107 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 G6PCP35575 357 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 ACSF3Q4G176 576 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-201ENST00000380701 IMMP1LQ96LU5 166 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 DUX5Q96PT3 197 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 PRSS22Q9GZN4 317 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TUBD1Q9UJT1 453 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TTC3P53804 2025 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 CNTRLQ7Z7A1 2325 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 A0A0B4J293 547 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 ZIC4Q8N9L1 334 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 DLL3Q9NYJ7 618 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 HILPDAQ9Y5L2 63 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 MYO10Q9HD67 2058 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 OOSP1A8MZH6 123 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 SRSF10O75494 262 aaKnown RBP6.16□□□□□ -1.42
CCDC171-201ENST00000380701 CA7P43166 264 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 DLK1P80370 383 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 GATAD1Q8WUU5 269 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 WNT5BQ9H1J7 359 aa6.16□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM74BQ9NUR3 256 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 938.3 ms