RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC25A46Q96AG3 418 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 KCTD12Q96CX2 325 aaKnown RBP15.31■□□□□ 0.04
SYNE4-202ENST00000340477 CABLES2Q9BTV7 478 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 RDH8Q9NYR8 311 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 ZNF230Q9UIE0 474 aaPredicted RBP15.31■□□□□ 0.04
SYNE4-202ENST00000340477 ZNF221Q9UK13 617 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 GPR12P47775 334 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 OR3A3P47888 321 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 VBP1P61758 197 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 EBI3Q14213 229 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 TET2Q6N021 2002 aaPredicted RBP15.3■□□□□ 0.04
SYNE4-202ENST00000340477 Q6ZS49 121 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 ODF3L1Q8IXM7 274 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 MAFIPQ8WZ33 124 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 SLC25A38Q96DW6 304 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 S100A16Q96FQ6 103 aaKnown RBP15.3■□□□□ 0.04
SYNE4-202ENST00000340477 MRPL20Q9BYC9 149 aaKnown RBP15.3■□□□□ 0.04
SYNE4-202ENST00000340477 C11orf54Q9H0W9 315 aaPredicted RBP15.3■□□□□ 0.04
SYNE4-202ENST00000340477 DCSTAMPQ9H295 470 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 SERTAD4Q9NUC0 356 aa15.3■□□□□ 0.04
SYNE4-202ENST00000340477 TRAV18A0A075B6X5 111 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 GSTT2P0CG29 244 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 GSTT2BP0CG30 244 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 KRTAP10-3P60369 221 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 C2orf68Q2NKX9 166 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 ZNF260Q3ZCT1 412 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 FBLN7Q53RD9 439 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 ANKRD13BQ86YJ7 626 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 C5orf56Q8N8D9 126 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 SAMD12Q8N8I0 201 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 NUDCD2Q8WVJ2 157 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 ST6GALNAC5Q9BVH7 336 aa15.29■□□□□ 0.04
SYNE4-202ENST00000340477 RBM7Q9Y580 266 aaKnown RBP15.29■□□□□ 0.04
SYNE4-202ENST00000340477 IGKV1-6A0A0C4DH72 117 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 FBXO24O75426 580 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 GABARAPO95166 117 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 CTXN2P0C2S0 81 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 TMEM95Q3KNT9 176 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 IGSF11Q5DX21 431 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 PRR31Q5SQ13 230 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 GPR107Q5VW38 600 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 ABHD14BQ96IU4 210 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 RASL11BQ9BPW5 248 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 NABP2Q9BQ15 211 aa15.28■□□□□ 0.04
SYNE4-202ENST00000340477 PARP12Q9H0J9 701 aaKnown RBP15.28■□□□□ 0.04
SYNE4-202ENST00000340477 TRBV6-7A0A0A0MS04 114 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 OR5H14A6NHG9 310 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 RORCP51449 518 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 RPL39P5Q59GN2 51 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 Q6ZS46 218 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 CENPVQ7Z7K6 275 aaPredicted RBP15.27■□□□□ 0.04
SYNE4-202ENST00000340477 Q8N6K4 173 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 ACOT12Q8WYK0 555 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 AP3S1Q92572 193 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 ABCG5Q9H222 651 aa15.27■□□□□ 0.04
SYNE4-202ENST00000340477 LIN7CQ9NUP9 197 aaKnown RBP15.27■□□□□ 0.04
SYNE4-202ENST00000340477 ELF5Q9UKW6 265 aaPredicted RBP15.27■□□□□ 0.04
SYNE4-202ENST00000340477 SH2D7A6NKC9 451 aaPredicted RBP15.26■□□□□ 0.03
SYNE4-202ENST00000340477 ZNF736B4DX44 427 aaPredicted RBP15.26■□□□□ 0.03
SYNE4-202ENST00000340477 AMY1AP04745 511 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 AMY2AP04746 511 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 MC5RP33032 325 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 MMDQ15546 238 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 TMEM69Q5SWH9 247 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 FOXRED2Q8IWF2 684 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 C11orf44Q8N8P7 122 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.26■□□□□ 0.03
SYNE4-202ENST00000340477 ZNF251Q9BRH9 671 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 AGMATQ9BSE5 352 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 WNT10AQ9GZT5 417 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 TOLLIPQ9H0E2 274 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 KIAA1456Q9P272 454 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 RNF150Q9ULK6 438 aa15.26■□□□□ 0.03
SYNE4-202ENST00000340477 H7C2Y5 167 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 KCNAB3O43448 404 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 XRCC3O43542 346 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 NOL3O60936 208 aaKnown RBP15.25■□□□□ 0.03
SYNE4-202ENST00000340477 APOA2P02652 100 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 OR8U9P0C7N5 309 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 CBX5P45973 191 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 ALDH3B2P48448 385 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 ARPC4P59998 168 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 MZT2AQ6P582 158 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 SLC35E3Q7Z769 313 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 OR8U1Q8NH10 309 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 OR2D2Q9H210 308 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 AUNIPQ9H7T9 357 aa15.25■□□□□ 0.03
SYNE4-202ENST00000340477 SMIM31A0A1B0GVY4 71 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 TFAP2AP05549 437 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 ACTBP60709 375 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 CBX3Q13185 183 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 CTF1Q16619 201 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 CNIH2Q6PI25 160 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 FAM131AQ6UXB0 335 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 OR4X2Q8NGF9 303 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 NAA50Q9GZZ1 169 aaKnown RBP15.24■□□□□ 0.03
SYNE4-202ENST00000340477 IFT46Q9NQC8 304 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 COMMD3Q9UBI1 195 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 ANXA10Q9UJ72 324 aa15.24■□□□□ 0.03
SYNE4-202ENST00000340477 WASHC3Q9Y3C0 194 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms