RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 RTTNQ86VV8 2226 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 A0A1B0GVG6 124 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 LINC00862A6NCI5 91 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 J3QLI3 93 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 HMMRO75330 724 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 TPM2P07951 284 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 STAG3L2P0CL84 134 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 ESDP10768 282 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 NPPCP23582 126 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 CRHBPP24387 322 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 PPP1CCP36873 323 aaKnown RBP0.56□□□□□ -2.32
SRP54-214ENST00000630962 NKAIN1Q4KMZ8 207 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 HES3Q5TGS1 186 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 TMEM42Q69YG0 159 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 LHFPL1Q86WI0 220 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 OR5D18Q8NGL1 313 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 SPACA4Q8TDM5 124 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 MED18Q9BUE0 208 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 METTL17Q9H7H0 456 aaPredicted RBP0.56□□□□□ -2.32
SRP54-214ENST00000630962 HHLA2Q9UM44 414 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 TTC41PQ6P2S7 1318 aa0.56□□□□□ -2.32
SRP54-214ENST00000630962 hCG_2039718K7EN88 272 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 MRPS14O60783 128 aaKnown RBP0.55□□□□□ -2.32
SRP54-214ENST00000630962 CD24P25063 80 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 RCVRNP35243 200 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 TSPEAR-AS2P59090 65 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 CD164Q04900 197 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 MTERF4Q7Z6M4 381 aaKnown RBP0.55□□□□□ -2.32
SRP54-214ENST00000630962 MITD1Q8WV92 249 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 KIAA1143Q96AT1 154 aaPredicted RBP0.55□□□□□ -2.32
SRP54-214ENST00000630962 ZNF707Q96C28 371 aaPredicted RBP0.55□□□□□ -2.32
SRP54-214ENST00000630962 TBX5Q99593 518 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 GTSF1LQ9H1H1 148 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 C16orf95Q9H693 158 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 RMND1Q9NWS8 449 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 ANGPT4Q9Y264 503 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 ADAMTSL1Q8N6G6 1762 aa0.55□□□□□ -2.32
SRP54-214ENST00000630962 TRBV6-5A0A0K0K1A5 114 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 CD7P09564 240 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 GADD45AP24522 165 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 OPRM1P35372 400 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 AKR1C3P42330 323 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 RPL14P50914 215 aaKnown RBP0.54□□□□□ -2.32
SRP54-214ENST00000630962 PDGFRLQ15198 375 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 ZNF791Q3KP31 576 aaPredicted RBP0.54□□□□□ -2.32
SRP54-214ENST00000630962 MRPL52Q86TS9 123 aaKnown RBP0.54□□□□□ -2.32
SRP54-214ENST00000630962 NAA40Q86UY6 237 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 OR4A15Q8NGL6 344 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 ANGPTL6Q8NI99 470 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 IFT81Q8WYA0 676 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 ACBD6Q9BR61 282 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 TMBIM4Q9HC24 238 aa0.54□□□□□ -2.32
SRP54-214ENST00000630962 A8MUN3 132 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 ZNF705FA8MVS1 300 aaPredicted RBP0.53□□□□□ -2.32
SRP54-214ENST00000630962 C8orf87E5RJ46 101 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 SLC17A3O00476 420 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 CDIPTO14735 213 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 STK16O75716 305 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 SC5DO75845 299 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 EPPINO95925 133 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 C1QCP02747 245 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 SFTPCP11686 197 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 EVX1P49640 407 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 TMEM258P61165 79 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 FGF12P61328 243 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 NNATQ16517 81 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 SLC35E3Q7Z769 313 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 OR11L1Q8NGX0 322 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 OR51H1Q8NH63 302 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 OR2AE1Q8NHA4 323 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 SUN5Q8TC36 379 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 PGLYRP3Q96LB9 341 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 DMAC2Q9NW81 257 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 STMN3Q9NZ72 180 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 COMMD9Q9P000 198 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 DNAJC12Q9UKB3 198 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 BZW2Q9Y6E2 419 aaKnown RBP0.53□□□□□ -2.32
SRP54-214ENST00000630962 RAB3GAP2Q9H2M9 1393 aa0.53□□□□□ -2.32
SRP54-214ENST00000630962 IGHV3-64A0A075B6Q5 118 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 TMSB15BA0A087X1C1 80 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 TRGV5A0A0B4J1U4 118 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 PHYHO14832 338 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 ZNF728P0DKX0 622 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 CDK2P24941 298 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 CD79BP40259 229 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 XCL1P47992 114 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 TAS2R45P59539 299 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 GTF2BQ00403 316 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 HNRNPA1L2Q32P51 320 aaKnown RBP0.52□□□□□ -2.33
SRP54-214ENST00000630962 FAM43BQ6ZT52 329 aaPredicted RBP0.52□□□□□ -2.33
SRP54-214ENST00000630962 Q6ZT83 130 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 LFNGQ8NES3 379 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 FGF13Q92913 245 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 CHST5Q9GZS9 411 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 FBXL15Q9H469 300 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 RPRD1BQ9NQG5 326 aaKnown RBP0.52□□□□□ -2.33
SRP54-214ENST00000630962 HHLA3Q9XRX5 114 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 STK38LQ9Y2H1 464 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 MICAL3Q7RTP6 2002 aa0.52□□□□□ -2.33
SRP54-214ENST00000630962 ZFHX2Q9C0A1 2572 aaPredicted RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms