RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 THRSPQ92748 146 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 PAK1IP1Q9NWT1 392 aaPredicted RBP10.53□□□□□ -0.72
SNX1-214ENST00000625244 SIGLEC8Q9NYZ4 499 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 PNMA8CA0A1B0GUJ8 204 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 OGG1O15527 345 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 IL1AP01583 271 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 HSMCR30P0CW71 290 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 CELP19835 753 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 YIF1BQ5BJH7 314 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 DEFB125Q8N687 156 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 OR5D14Q8NGL3 314 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 UFD1Q92890 307 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 FGGYQ96C11 551 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 CHST5Q9GZS9 411 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 LRP1BQ9NZR2 4599 aa10.52□□□□□ -0.73
SNX1-214ENST00000625244 IGHV7-81A0A0B4J1V7 117 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 NPIPB11E5RHQ5 1161 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 SLC33A1O00400 549 aaPredicted RBP10.51□□□□□ -0.73
SNX1-214ENST00000625244 MAGEB3O15480 346 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 ZNF44P15621 663 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 PRKACBP22694 351 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 TBCEQ15813 527 aaPredicted RBP10.51□□□□□ -0.73
SNX1-214ENST00000625244 DMKNQ6E0U4 476 aaPredicted RBP10.51□□□□□ -0.73
SNX1-214ENST00000625244 XAF1Q6GPH4 301 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 Q6P435 159 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 SERPINA12Q8IW75 414 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 ZFP41Q8N8Y5 198 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 ZNF565Q8N9K5 539 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 OR51A4Q8NGJ6 313 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 RTN4IP1Q8WWV3 396 aaPredicted RBP10.51□□□□□ -0.73
SNX1-214ENST00000625244 RGP1Q92546 391 aaPredicted RBP10.51□□□□□ -0.73
SNX1-214ENST00000625244 GHSRQ92847 366 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 BORCS8Q96FH0 119 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 CPNE2Q96FN4 548 aaPredicted RBP10.51□□□□□ -0.73
SNX1-214ENST00000625244 WFDC10AQ9H1F0 79 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 LRRC42Q9Y546 428 aa10.51□□□□□ -0.73
SNX1-214ENST00000625244 A0A0J9YWU9 116 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 A0A1W2PN81 502 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 TNFAIP8O95379 198 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 CYB5AP00167 134 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 LALBAP00709 142 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 CD1AP06126 327 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 MAPK3P27361 379 aaPredicted RBP10.5□□□□□ -0.73
SNX1-214ENST00000625244 BLVRBP30043 206 aaPredicted RBP10.5□□□□□ -0.73
SNX1-214ENST00000625244 CHRNA7P36544 502 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 SOX2P48431 317 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 CD81P60033 236 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 PPP3R1P63098 170 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 IRF3Q14653 427 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 SLC16A12Q6ZSM3 486 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 UTS2BQ765I0 119 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 ZNF367Q7RTV3 350 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 ZNF485Q8NCK3 441 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 OR10AC1Q8NH08 325 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 FCGR1BQ92637 280 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 SPSB1Q96BD6 273 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 ADAT3Q96EY9 351 aaPredicted RBP10.5□□□□□ -0.73
SNX1-214ENST00000625244 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 SRD5A3Q9H8P0 318 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 VCX3AQ9NNX9 186 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 KIF25Q9UIL4 384 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 FBXO7Q9Y3I1 522 aa10.5□□□□□ -0.73
SNX1-214ENST00000625244 APOBP04114 4563 aaKnown RBP10.49□□□□□ -0.73
SNX1-214ENST00000625244 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 IGKV1-12A0A0C4DH73 117 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 ARPC1BO15143 372 aaKnown RBP10.49□□□□□ -0.73
SNX1-214ENST00000625244 TPPPO94811 219 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 IGKV1D-12P01611 117 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 ATF1P18846 271 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 RAB3AP20336 220 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 SSTR5P35346 364 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 ATP1B3P54709 279 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 MLLT11Q13015 90 aaPredicted RBP10.49□□□□□ -0.73
SNX1-214ENST00000625244 ECSCRQ19T08 205 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 Q499Y3 187 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 KCTD21Q4G0X4 260 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 LCN12Q6JVE5 192 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 ZNF773Q6PK81 442 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 MS4A15Q8N5U1 240 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 OR9G4Q8NGQ1 327 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 OR13C9Q8NGT0 318 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 MRGPRDQ8TDS7 321 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 RHOVQ96L33 236 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 SPACA5Q96QH8 159 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 MGLLQ99685 303 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 NEURL2Q9BR09 285 aa10.49□□□□□ -0.73
SNX1-214ENST00000625244 TRAV39A0A0B4J263 110 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 HSPB6O14558 160 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 SULT1B1O43704 296 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 HLA-DRB1P01911 266 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 CD7P09564 240 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 PSMA1P25786 263 aaKnown RBP10.48□□□□□ -0.73
SNX1-214ENST00000625244 MAP2K4P45985 399 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms