RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 OR4D5Q8NGN0 318 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 OR1S2Q8NGQ3 325 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 LHFPL5Q8TAF8 219 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 MRPL30Q8TCC3 161 aaKnown RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 FAM216AQ8WUB2 273 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 TMED6Q8WW62 240 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 ITLN2Q8WWU7 325 aaPredicted RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 NARS2Q96I59 477 aaKnown RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 NRIP2Q9BQI9 281 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 GINS3Q9BRX5 216 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 SEC11CQ9BY50 192 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 BCL2L14Q9BZR8 327 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 FGF23Q9GZV9 251 aaPredicted RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 SEBOXQ9HB31 216 aaPredicted RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 NGBQ9NPG2 151 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 KCNIP1Q9NZI2 227 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 COQ3Q9NZJ6 369 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 JKAMPQ9P055 326 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 FBXL17Q9UF56 701 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 OR2W1Q9Y3N9 320 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 LSM5Q9Y4Y9 91 aaKnown RBP4.85□□□□□ -1.63
SDF2-206ENST00000587788 FAM215AQ9Y5M1 114 aa4.85□□□□□ -1.63
SDF2-206ENST00000587788 TRAV24A0A0B4J272 114 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 UMAD1C9J7I0 102 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 IFNL4K9M1U5 179 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 HSPA12AO43301 675 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 SYNGR1O43759 233 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 MED6O75586 246 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 PGLYRP1O75594 196 aaPredicted RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 SNAPINO95295 136 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 IGKV3-15P01624 115 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 SERPINE2P07093 398 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 SCTP09683 121 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 PGA5P0DJD9 388 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 KITLGP21583 273 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 F2RP25116 425 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 NKX2-1P43699 371 aaPredicted RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 VAMP2P63027 116 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 DEFA5Q01523 94 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 BTN1A1Q13410 526 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 ZNF273Q14593 569 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 OR8G1Q15617 311 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 PXDC1Q5TGL8 231 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 RPL7L1Q6DKI1 246 aaKnown RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 OR2T2Q6IF00 324 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 Q6P435 159 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 VWA1Q6PCB0 445 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 ZNF497Q6ZNH5 498 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 FOXRED2Q8IWF2 684 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 H1FOOQ8IZA3 346 aaPredicted RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 SELENOHQ8IZQ5 122 aaKnown RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 TCTEX1D1Q8N7M0 179 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 SLC35G3Q8N808 338 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 WDR31Q8NA23 367 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 NAXEQ8NCW5 288 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 LFNGQ8NES3 379 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 LYPD6BQ8NI32 183 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 SECTM1Q8WVN6 248 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 FAM168AQ92567 244 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 DYRK2Q92630 601 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 LSM10Q969L4 123 aaKnown RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 GNPNAT1Q96EK6 184 aaPredicted RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 TP53RKQ96S44 253 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 ADAT1Q9BUB4 502 aaKnown RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 NKX6-2Q9C056 277 aaPredicted RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 CXXC4Q9H2H0 198 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 SMDT1Q9H4I9 107 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 PLEKHF2Q9H8W4 249 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 OR2S2Q9NQN1 319 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 ZNF581Q9P0T4 197 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 TAAR3PQ9P1P4 343 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 NDRG3Q9UGV2 375 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 WIPI2Q9Y4P8 454 aa4.84□□□□□ -1.63
SDF2-206ENST00000587788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.84□□□□□ -1.63
SDF2-206ENST00000587788 PTPN13Q12923 2485 aa4.84□□□□□ -1.64
SDF2-206ENST00000587788 A0A0G2JNJ9 132 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 A0A1B0GW64 132 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 A0A1B0GWJ7 208 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TMEM30CPA0ZSE6 113 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 NKX2-6A6NCS4 301 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 BTBD17A6NE02 478 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 F8W036 122 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 C19orf84I3L1E1 186 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 HS3ST1O14792 307 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 KCNAB3O43448 404 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 PITX3O75364 302 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 SCO1O75880 301 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 LYZL6O75951 148 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 DFFBO76075 338 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 NXPH2O95156 264 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TSPAN15O95858 294 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 IGLV1-44P01699 117 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 DANCRP0C864 163 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 SPP1P10451 314 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 ZNF44P15621 663 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 AGAP20933 346 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 BMP5P22003 454 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms