RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ZNF833PQ6ZTB9 187 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 SERPINA12Q8IW75 414 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 OR5D14Q8NGL3 314 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 DNAJC9Q8WXX5 260 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 OR2S2Q9NQN1 319 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 SLC23A1Q9UHI7 598 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 TRAPPC2LQ9UL33 140 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 DHDHQ9UQ10 334 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 PKD1P98161 4303 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 SAA2-SAA4A0A096LPE2 208 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 C13orf42A0A1B0GVH6 325 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 OR11H12B2RN74 326 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 SLC16A6O15403 523 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 FKBP6O75344 327 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 TFAP2AP05549 437 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 SAA2P0DJI9 122 aaPredicted RBP9.71□□□□□ -0.86
VPS29-211ENST00000553128 EDN2P20800 178 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 SERPINA2P20848 420 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 POLR2IP36954 125 aaKnown RBP9.71□□□□□ -0.86
VPS29-211ENST00000553128 PRR20EP86478 221 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 PRR20CP86479 221 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 PRR20DP86480 221 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 PRR20BP86481 221 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 PRR20AP86496 221 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 STEAP3Q658P3 488 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 ZNF529Q6P280 563 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 GLDNQ6ZMI3 551 aaPredicted RBP9.71□□□□□ -0.86
VPS29-211ENST00000553128 ARHGAP24Q8N264 748 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 OR5T1Q8NG75 326 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 PARP12Q9H0J9 701 aaKnown RBP9.71□□□□□ -0.86
VPS29-211ENST00000553128 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 ING4Q9UNL4 249 aa9.71□□□□□ -0.86
VPS29-211ENST00000553128 HSPG2P98160 4391 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 J3QLW9 94 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 J3QRE1 110 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 RBMXL2O75526 392 aaKnown RBP9.7□□□□□ -0.86
VPS29-211ENST00000553128 FAM107AO95990 144 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 CA2P00918 260 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 ZNF19P17023 458 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 LGALS9CQ6DKI2 356 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 POC5Q8NA72 575 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 C4orf36Q96KX1 117 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 PDCD1LG2Q9BQ51 273 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 TAF9BQ9HBM6 251 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 SLC2A8Q9NY64 477 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 TAS2R4Q9NYW5 299 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 SELENOKQ9Y6D0 94 aa9.7□□□□□ -0.86
VPS29-211ENST00000553128 AQP12BA6NM10 295 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 FADS2O95864 444 aaKnown RBP9.69□□□□□ -0.86
VPS29-211ENST00000553128 CT45A6P0DMU7 189 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 CT45A5P0DMU8 189 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 CT45A7P0DMV0 189 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 RAB3AP20336 220 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 CD40LGP29965 261 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 SSBP2P81877 361 aaPredicted RBP9.69□□□□□ -0.86
VPS29-211ENST00000553128 RPL39P5Q59GN2 51 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 C6orf183Q5T699 404 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 ZNF562Q6V9R5 426 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 KCTD20Q7Z5Y7 419 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 AQP12AQ8IXF9 295 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 GAPTQ8N292 157 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 GRPEL2Q8TAA5 225 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 MRPS24Q96EL2 167 aaKnown RBP9.69□□□□□ -0.86
VPS29-211ENST00000553128 NRBF2Q96F24 287 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 METTL9Q9H1A3 318 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 ZNF446Q9NWS9 450 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 IL36GQ9NZH8 169 aa9.69□□□□□ -0.86
VPS29-211ENST00000553128 PEF1Q9UBV8 284 aaKnown RBP9.69□□□□□ -0.86
VPS29-211ENST00000553128 DAPL1A0PJW8 107 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 E9PI62 339 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 SOX2P48431 317 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 MPV17LQ2QL34 196 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 TMEM30BQ3MIR4 351 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 KDM4DQ6B0I6 523 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 ZNF343Q6P1L6 599 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 STX19Q8N4C7 294 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 OR2K2Q8NGT1 345 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 TSEN15Q8WW01 171 aaKnown RBP9.68□□□□□ -0.86
VPS29-211ENST00000553128 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
VPS29-211ENST00000553128 ISG20L2Q9H9L3 353 aaKnown RBP9.68□□□□□ -0.86
VPS29-211ENST00000553128 ARGLU1Q9NWB6 273 aaPredicted RBP9.68□□□□□ -0.86
VPS29-211ENST00000553128 RCC2Q9P258 522 aaKnown RBP9.68□□□□□ -0.86
VPS29-211ENST00000553128 METTL1Q9UBP6 276 aaKnown RBP9.68□□□□□ -0.86
VPS29-211ENST00000553128 A0A0G2JLM5 398 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 H0YJW9 148 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 ST8SIA5O15466 376 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 MAGEB3O15480 346 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 OR2A4O95047 310 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 PSG5Q15238 335 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 GUCA2BQ16661 112 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 RPEL1Q2QD12 228 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 MOGAT2Q3SYC2 334 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 SLC22A6Q4U2R8 563 aa9.67□□□□□ -0.86
VPS29-211ENST00000553128 SPATA24Q86W54 205 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms