RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KIAA0087Q14695 138 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF146Q15072 292 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 AGTRAPQ6RW13 159 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 PDZD9Q8IXQ8 264 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 RXFP4Q8TDU9 374 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF778Q96MU6 729 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ZBP1Q9H171 429 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 DEFB127Q9H1M4 99 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 WASHC3Q9Y3C0 194 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SLC25A15Q9Y619 301 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ENPP4Q9Y6X5 453 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 CHD4Q14839 1912 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 H7BYZ3 331 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 MRASO14807 208 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ANGPTL7O43827 346 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 HBZP02008 142 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SERPINE1P05121 402 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 PSMB9P28065 219 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SRIP30626 198 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SLC18A1P54219 525 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 EIF3IQ13347 325 aaKnown RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 PAFAH1B3Q15102 231 aaKnown RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ABCA11PQ4W5N1 156 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 LDLRAD2Q5SZI1 272 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 FAM53AQ6NSI3 398 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SBSNQ6UWP8 590 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 IL34Q6ZMJ4 242 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 Q6ZSR6 202 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 GDPD1Q8N9F7 314 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 HIST1H2BAQ96A08 127 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 NEURL3Q96EH8 262 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 TMEM243Q9BU79 118 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 LINC00470Q9BZP3 86 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SH3BGRL3Q9H299 93 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 TVP23BQ9NYZ1 205 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ARHGAP23Q9P227 1491 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 KNCNA6PVL3 124 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF354AO60765 605 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 BANF1O75531 89 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 MT-ND4LP03901 98 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 CDKN2AP42771 156 aaKnown RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ATP5G3P48201 142 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 POLR2HP52434 150 aaKnown RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SNRPD2P62316 118 aaKnown RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 NRF1Q16656 503 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 UGT2A3Q6UWM9 527 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 OOSP2Q86WS3 158 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SLC25A40Q8TBP6 338 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 LMX1AQ8TE12 382 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 HSD17B10Q99714 261 aaKnown RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 MOB1AQ9H8S9 216 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 PLSCR3Q9NRY6 295 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 PHLPP1O60346 1717 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 IGHV1OR15-1A0A075B7D0 117 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 A0A087WUU8 490 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 A0A0J9YY10 115 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 KLLNB2CW77 178 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 C8GP07360 202 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 SPI1P17947 270 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 FHL1Q13642 323 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 ARFRP1Q13795 201 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 IAH1Q2TAA2 248 aaPredicted RBP3.97□□□□□ -1.77
NIPBL-204ENST00000504430 C12orf74Q32Q52 190 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 CST9LQ9H4G1 147 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 POMPQ9Y244 141 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 hCG_1818297A0A087WSY0 165 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 A8MT66 165 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 IGHG1P01857 330 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 TDGF1P3P51864 188 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 PSG7Q13046 419 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 HTR4Q13639 388 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 FHL2Q14192 279 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 KIAA0040Q15053 153 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 RNF212Q495C1 297 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 Q499Y3 187 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 SLC22A24Q8N4F4 322 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 OR5H6Q8NGV6 325 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 IGF2BP2-AS1Q96M15 143 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 PEBP4Q96S96 227 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 TRAV9-2A0A087WT02 112 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 TEX50A0A1B0GTY4 177 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 LOC389332A0A1B0GUA5 103 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 NKX2-6A6NCS4 301 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 FABP5P3A8MUU1 101 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 GATA2P23769 480 aaPredicted RBP3.97□□□□□ -1.77
NIPBL-204ENST00000504430 HERVK_113P63121 156 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 FABP5Q01469 135 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 C16orf72Q14CZ0 275 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 TAF9Q16594 264 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 NXNL2Q5VZ03 156 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 FLVCR1-AS1Q8TAF5 88 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 TMEM126AQ9H061 195 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 JPT2Q9H910 190 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 PRTFDC1Q9NRG1 225 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 CCL28Q9NRJ3 127 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 ITGB4P16144 1822 aa3.97□□□□□ -1.77
NIPBL-204ENST00000504430 D6RAR5 112 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 CORTO00230 105 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms