RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 MRPL21Q7Z2W9 205 aaKnown RBP11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 ZNF664Q8N3J9 261 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 OR10V1Q8NGI7 309 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 OR51G1Q8NGK1 321 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 IL1F10Q8WWZ1 152 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 PSMF1Q92530 271 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 LHX4Q969G2 390 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 HIST1H2AAQ96QV6 131 aa11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.64
PDZRN3-205ENST00000466780 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 A8MWP6 167 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 CYTIPO60759 359 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 NGFP01138 241 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 IFNA1P01562 189 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 FGF7P21781 194 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 RPL23P62829 140 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 PMS2P11Q13670 270 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 ELOVL1Q9BW60 279 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 PPP1R3CQ9UQK1 317 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 DMDP11532 3685 aa11.02□□□□□ -0.65
PDZRN3-205ENST00000466780 TRAPPC6AO75865 159 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 KBTBD11O94819 623 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 TUBG1P23258 451 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 HBG1P69891 147 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 HBG2P69892 147 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 MEF2BQ02080 365 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 HNF4GQ14541 408 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 TESK1Q15569 626 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 BSXQ3C1V8 233 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 SPANXN5Q5MJ07 72 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 CENPVQ7Z7K6 275 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 TAF15Q92804 592 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 PINX1Q96BK5 328 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 RPUSD4Q96CM3 377 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 C2orf88Q9BSF0 95 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 ACTR3CQ9C0K3 210 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 ARHGAP21Q5T5U3 1957 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 UBE2L5PA0A1B0GUS4 154 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 XKRY2A2RUG3 117 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 LILRA1O75019 489 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 IL18BPO95998 194 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 P04436 131 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 SNRPCP09234 159 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 APLNRP35414 380 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 RTP5Q14D33 572 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 CLEC12BQ2HXU8 276 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 IFI44Q8TCB0 444 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 SGCZQ96LD1 299 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 PARD6GQ9BYG4 376 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 DEPPQ9NTK1 212 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 DLL3Q9NYJ7 618 aa11.01□□□□□ -0.65
PDZRN3-205ENST00000466780 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11□□□□□ -0.65
PDZRN3-205ENST00000466780 CCL4P13236 92 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 IL11RAQ14626 422 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 ACSM6Q6P461 480 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 TGIF2LYQ8IUE0 185 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 OR2Y1Q8NGV0 311 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 RAB24Q969Q5 203 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 PCGF1Q9BSM1 259 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 SLC39A9Q9NUM3 307 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 PINLYPA6NC86 204 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 SS18L1O75177 396 aaPredicted RBP11□□□□□ -0.65
PDZRN3-205ENST00000466780 CEACAM6P40199 344 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 GALR1P47211 349 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 IGFBP7Q16270 282 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 NRN1LQ496H8 165 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 PNPLA5Q7Z6Z6 429 aaPredicted RBP11□□□□□ -0.65
PDZRN3-205ENST00000466780 OR5A2Q8NGI9 324 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 UBALD1Q8TB05 177 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 GATAD1Q8WUU5 269 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 H7BYZ3 331 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
PDZRN3-205ENST00000466780 ZNF66Q6ZN08 573 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 OR5P3Q8WZ94 311 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 TMEM45BQ96B21 275 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 STRADBQ9C0K7 418 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 PARLQ9H300 379 aa11□□□□□ -0.65
PDZRN3-205ENST00000466780 ESPL1Q14674 2120 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 DIDO1Q9BTC0 2240 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 NPIPB11E5RHQ5 1161 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 DEGS1O15121 323 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 MRPL33O75394 65 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 FOSL1P15407 271 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 PDLIM4P50479 330 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 Q0VFX4 171 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 PRSS8Q16651 343 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 OR8G2PQ6IF36 304 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 LINC00596Q86U02 117 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 FAM58AQ8N1B3 248 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 TMEM9BQ9NQ34 198 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 FREM2Q5SZK8 3169 aa10.99□□□□□ -0.65
PDZRN3-205ENST00000466780 PPP5D1E7EU14 171 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms