RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 B9D1Q9UPM9 204 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 GAB2Q9UQC2 676 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 ERGIC3Q9Y282 383 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 SNX24Q9Y343 169 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 FIS1Q9Y3D6 152 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 TMED3Q9Y3Q3 217 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 U3KQV3 271 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 A0A1W2PPE3 182 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 H3BUA1 57 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 PGRMC1O00264 195 aaKnown RBP3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 RS1O15537 224 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 ZCCHC18P0CG32 403 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 C8orf88P0DMB2 117 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 CLUP10909 449 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 NFYBP25208 207 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 IL12AP29459 219 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 RBM34P42696 430 aaKnown RBP3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 SLC7A2P52569 658 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 TMEM267Q0VDI3 215 aaPredicted RBP3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 USF2Q15853 346 aaPredicted RBP3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 LPCAT4Q643R3 524 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 FAHD1Q6P587 224 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 PPP1R27Q86WC6 154 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF573Q86YE8 665 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 APRG1Q8IVJ8 170 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 TIGD4Q8IY51 512 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 FTMTQ8N4E7 242 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 LFNGQ8NES3 379 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 OR51A7Q8NH64 312 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 TMEM239Q8WW34 195 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 RERGLQ9H628 205 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 N6AMT1Q9Y5N5 214 aa3.54□□□□□ -1.84
SBDSP1-204ENST00000453858 TRAV27A0A087WT01 109 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 ODAMA1E959 279 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 OR5B21A6NL26 309 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 C15orf61A6NNL5 157 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 J3QT63 122 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 CTDSP2O14595 271 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 NDUFA3O95167 84 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 CA1P00915 261 aaPredicted RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 MYOD1P15172 320 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 CFL1P23528 166 aaKnown RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 NPY1RP25929 384 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 HTR1FP30939 366 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 S100A3P33764 101 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 PTGFRP43088 359 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 HOXA1P49639 335 aaPredicted RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 BRWD1-AS2P59051 145 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 LINC00315P59091 139 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 ERVFC1-1P60608 527 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 DEFA5Q01523 94 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 RELQ04864 619 aaPredicted RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 RGNQ15493 299 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 MMDQ15546 238 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 SNCBQ16143 134 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF674Q2M3X9 581 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 UNQ5815/PRO19632Q6UWF5 114 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 TIFABQ6ZNK6 161 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 CENPSQ8N2Z9 138 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 LINC00311Q8N616 119 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 SPC24Q8NBT2 197 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 UXS1Q8NBZ7 420 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 CSNK1G2-AS1Q8NCQ2 148 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 SPAG8Q99932 426 aaPredicted RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 FAM103A1Q9BTL3 118 aaKnown RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 FUT8Q9BYC5 575 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 AIG1Q9NVV5 245 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 MTCH1Q9NZJ7 389 aa3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 SAMD4AQ9UPU9 718 aaKnown RBP3.53□□□□□ -1.84
SBDSP1-204ENST00000453858 A0A1B0GW64 132 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 A0A1W2PP11 408 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 PQLC2LA1A4F0 135 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 PRORSD1PA6NEY8 169 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 ZNF729A6NN14 1252 aaPredicted RBP3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 XKRYO14609 159 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 CHRNGP07510 517 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 AADACP22760 399 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 GABRR1P24046 479 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 RPS27P42677 84 aaKnown RBP3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 HAAOP46952 286 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 ZNF137PP52743 207 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 CBX1P83916 185 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 DR1Q01658 176 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 AESQ08117 197 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 PCLAFQ15004 111 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 REEP3Q6NUK4 255 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 SLC38A6Q8IZM9 456 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 SMYD1Q8NB12 490 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 OR5T1Q8NG75 326 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 OR10X1Q8NGY0 326 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 OR2AJ1Q8NGZ0 328 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 KCNG3Q8TAE7 436 aa3.52□□□□□ -1.85
SBDSP1-204ENST00000453858 SECTM1Q8WVN6 248 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms