RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HMSDA8MTL9 139 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 A8MV72 311 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 C12orf77C9JDV5 145 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 GOSR2O14653 212 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 ITGB1BP1O14713 200 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SIGLEC5O15389 551 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 MPPED1O15442 326 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 NDUFB3O43676 98 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CYB5R3P00387 301 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 PLAUP00749 431 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 IFNA21P01568 189 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CD8AP01732 235 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 HBZP02008 142 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 WNT2P09544 360 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 IGFBP2P18065 325 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 NFYAP23511 347 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 DNASE1P24855 282 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CD80P33681 288 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CEACAM6P40199 344 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 UQCRFS1P47985 274 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 GLIPR1P48060 266 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CEBPDP49716 269 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLURP1P55000 103 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 FXYD4P59646 89 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 AESQ08117 197 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CD300CQ08708 224 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 BAMBIQ13145 260 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SNTB1Q13884 538 aaKnown RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 HERPUD1Q15011 391 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CDSNQ15517 529 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SPRNQ5BIV9 151 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LRRC10Q5BKY1 277 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CT83Q5H943 113 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LY6G6FQ5SQ64 297 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CLEC18BQ6UXF7 455 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 Q6ZPA2 131 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF788Q6ZQV5 615 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LCNL1Q6ZST4 164 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LDLRAD3Q86YD5 345 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 KRTAP19-1Q8IUB9 90 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LGI3Q8N145 548 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 TCTEX1D1Q8N7M0 179 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SYT8Q8NBV8 401 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZBTB34Q8NCN2 500 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 DEFB108BQ8NET1 73 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR10V1Q8NGI7 309 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR52B4Q8NGK2 314 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR52M1Q8NGK5 317 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CASTOR1Q8WTX7 329 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SECTM1Q8WVN6 248 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 RTN4IP1Q8WWV3 396 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 IL1F10Q8WWZ1 152 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CCL17Q92583 94 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CORO2AQ92828 525 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 RAB1CQ92928 201 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 ARL11Q969Q4 196 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 GALNT14Q96FL9 552 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 TIMD4Q96H15 378 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 COQ2Q96H96 371 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 GAFA1Q96PS6 74 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 NMES1Q9C002 83 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 FXYD6Q9H0Q3 95 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM222Q9H0R3 208 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LIME1Q9H400 295 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 NAA60Q9H7X0 242 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 METTL8Q9H825 291 aaKnown RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 LINC00574Q9H8X3 128 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLC2A9Q9NRM0 540 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZFP57Q9NU63 452 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 RDH8Q9NYR8 311 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 COMMD9Q9P000 198 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 KAAG1Q9UBP8 84 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 UBE2J1Q9Y385 318 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 RBM7Q9Y580 266 aaKnown RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 MAB21L2Q9Y586 359 aa3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 KLF2Q9Y5W3 355 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 YLPM1P49750 1951 aaKnown RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 RAI1Q7Z5J4 1906 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P37-201ENST00000439613 TRAV39A0A0B4J263 110 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 C3orf85A0A1B0GTC6 90 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 KBTBD11-OT1A0A1B0GTJ5 212 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 C13orf42A0A1B0GVH6 325 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 A0A1W2PPH5 198 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 C5orf51A6NDU8 294 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF729A6NN14 1252 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 A6NNC1 897 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 FAM25EA8MYX2 175 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 F2RL2O00254 374 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TNFRSF13BO14836 293 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PGLYRP1O75594 196 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ATG12O94817 140 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 GYPAP02724 150 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms