RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 IGHV3-13P01766 116 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CD74P04233 296 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 FCGR3AP08637 254 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM106CPP0CH98 169 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RNF224P0DH78 156 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 PGA5P0DJD9 388 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 PGAM2P15259 253 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ANXA7P20073 488 aaKnown RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 DTYMKP23919 212 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MPZP25189 248 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MDH2P40926 338 aaKnown RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CD200P41217 278 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 EIF2B2P49770 351 aaKnown RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RAG2P55895 527 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM50BP56557 158 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 TAS2R31P59538 309 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 HERV-K104P61576 105 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RRAS2P62070 204 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 TNFAIP6P98066 277 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 BSPH1Q075Z2 132 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CDK10Q15131 360 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGFBP7Q16270 282 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MICBQ29980 383 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM30BQ3MIR4 351 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 FBXL19-AS1Q494R0 122 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZFP69Q49AA0 526 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 NHLRC3Q5JS37 347 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SPIN3Q5JUX0 258 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 VAX1Q5SQQ9 334 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 C11orf88Q6PI97 169 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 IDO2Q6ZQW0 420 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 DNM1P46Q6ZS02 220 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MOB1BQ7L9L4 216 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 WDR86Q86TI4 376 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 HOGA1Q86XE5 327 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 STPG4Q8N801 248 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZDHHC22Q8N966 263 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 NUP37Q8NFH4 326 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5AP2Q8NGF4 316 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5T2Q8NGG2 359 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR4D10Q8NGI6 311 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR11L1Q8NGX0 322 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5R1Q8NH85 324 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 LRRC29Q8WV35 223 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ST8SIA4Q92187 359 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 DYRK2Q92630 601 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RDH5Q92781 318 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MRPL24Q96A35 216 aaKnown RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RNF125Q96EQ8 232 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 HARBI1Q96MB7 349 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SCGB3A2Q96PL1 93 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC25A21Q9BQT8 299 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SULT4A1Q9BR01 284 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 HDHD3Q9BSH5 251 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAAP24Q9BTP7 215 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 GFRA4Q9GZZ7 299 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 DNTTIP1Q9H147 329 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR51J1Q9H342 316 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 FN3KRPQ9HA64 309 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CA10Q9NS85 328 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 UFSP2Q9NUQ7 469 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 NECAP2Q9NVZ3 263 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 C1orf123Q9NWV4 160 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC2A8Q9NY64 477 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MTCH1Q9NZJ7 389 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 TAAR3PQ9P1P4 343 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ANXA10Q9UJ72 324 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF222Q9UK12 451 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ANAPC10Q9UM13 185 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 C14orf166Q9Y224 244 aaKnown RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 KCNK7Q9Y2U2 307 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RNF115Q9Y4L5 304 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 MYO7BQ6PIF6 2116 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SHANK1Q9Y566 2161 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CUL9Q8IWT3 2517 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CNOT1A5YKK6 2376 aaKnown RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZFHX2Q9C0A1 2572 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 GVINP1Q7Z2Y8 2422 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZGRF1Q86YA3 2104 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF292O60281 2723 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGLV3-9A0A075B6K5 115 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 KIR2DS1A0A191URI9 304 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM30CPA0ZSE6 113 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 DPRXA6NFQ7 191 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 NKX6-3A6NJ46 265 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 F8VVB4 439 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 F8VWA3 439 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 SDCBPO00560 298 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 DIRAS3O95661 229 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR2H2O95918 312 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 HAND1O96004 215 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGHV4-39P01824 125 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 HLA-AP01891 365 aaKnown RBP3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 IL5P05113 134 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 GLAP06280 429 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 HOXB5P09067 269 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 ANXA3P12429 323 aa3.13□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF250P15622 560 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms