RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 OR4C45A6NMZ5 311 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 KLLNB2CW77 178 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 EEF1E1-BLOC1S5C9J1V9 151 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 LOC110117498-PIK3R3F6TDL0 507 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 M0R135 149 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 EEF1E1O43324 174 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SC5DO75845 299 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 LYZL6O75951 148 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 GABARAPO95166 117 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 CA1P00915 261 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SERPINA3P01011 423 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 HLA-DPB1P04440 258 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SERPINA5P05154 406 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 ISG15P05161 165 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 UBCP0CG48 685 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 DNAH10OSP0CZ25 163 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 CD36P16671 472 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF14P17017 642 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 CELP19835 753 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SERPINA2P20848 420 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TUBG1P23258 451 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 IL32P24001 234 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 PSMB9P28065 219 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 HSD11B1P28845 292 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 FGF9P31371 208 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TGFBR2P37173 567 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 PEX19P40855 299 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPS27P42677 84 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RGS6P49758 472 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 GDI2P50395 445 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 GTF2A1P52655 376 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMBIM6P55061 237 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SSX1Q16384 188 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RSPO1Q2MKA7 263 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 HIKESHIQ53FT3 197 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 YIF1BQ5BJH7 314 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 PABPC1L2AQ5JQF8 200 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR2B11Q5JQS5 317 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMEM244Q5VVB8 128 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 CD200R1LQ6Q8B3 271 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 Q6ZSR3 168 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 LUZP2Q86TE4 346 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 MS4A15Q8N5U1 240 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 WDR31Q8NA23 367 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR52H1Q8NGJ2 320 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF420Q8TAQ5 688 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RAB2BQ8WUD1 216 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 UFD1Q92890 307 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPL3LQ92901 407 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RNASE6Q93091 150 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 MUCL1Q96DR8 90 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 YIPF6Q96EC8 236 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF799Q96GE5 643 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 PGLYRP3Q96LB9 341 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 DOK1Q99704 481 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC6A7Q99884 636 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SH3GL3Q99963 347 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TPPP3Q9BW30 176 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 FAM192AQ9GZU8 254 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 RGCCQ9H4X1 137 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 ISG20L2Q9H9L3 353 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TUBG2Q9NRH3 451 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 NDUFB11Q9NX14 153 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 FAM206AQ9NX38 181 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 NUFIP1Q9UHK0 495 aaKnown RBP3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SH3BGRL2Q9UJC5 107 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 GNG8Q9UK08 70 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 MAB21L2Q9Y586 359 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC25A15Q9Y619 301 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 CACNA1DQ01668 2161 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 DOPEY2Q9Y3R5 2298 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMEM269A0A1B0GVZ9 245 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 A0A1B0GWJ7 208 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF705EA8MWA4 302 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 F5H5K5 113 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 H3BSA7 217 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC22A1O15245 554 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 MAGEB4O15481 346 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 XRCC2O43543 280 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 AIREO43918 545 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 GATBO75879 557 aaKnown RBP3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPP14O95059 124 aaKnown RBP3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 IGLV3-1P01715 115 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 HLA-HP01893 362 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 TTRP02766 147 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 ACSM4P0C7M7 580 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR8U8P0C7N1 319 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 HSMCR30P0CW71 290 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF35P13682 527 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 CCL1P22362 96 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 CFL1P23528 166 aaKnown RBP3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 STOMP27105 288 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 APLNRP35414 380 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 UGT2B10P36537 528 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 CRYBB2P43320 205 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 KIR3DL2P43630 455 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 CX3CR1P49238 355 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 PRKXP51817 358 aa3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF121P58317 390 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPS11P62280 158 aaKnown RBP eCLIP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms