RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 WFDC3Q8IUB2 231 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 GMPPAQ96IJ6 420 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-202ENST00000396578 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 KCNAB3O43448 404 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 ZNF273Q14593 569 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 C16orf92Q96LL3 132 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 GPA33Q99795 319 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 MPDU1O75352 247 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 DNAL4O96015 105 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 PRSS12P56730 875 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 ABHD14BQ96IU4 210 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 PMCHL2Q9BQD1 86 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 MRPL18Q9H0U6 180 aaKnown RBP12.22□□□□□ -0.45
COL4A3-202ENST00000396578 HOXC4P09017 264 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-202ENST00000396578 CT62P0C5K7 136 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 IL36RNQ9UBH0 155 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 FAM186AA6NE01 2351 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 NDUFB4O95168 129 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 C2CD4DB7Z1M9 353 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 CEACAM18A8MTB9 384 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 SLC25A34Q6PIV7 304 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 DDA1Q9BW61 102 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 HEXA-AS1Q9H8Q6 139 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 A0A1W2PQD3 144 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 HES3Q5TGS1 186 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 ATG4DQ86TL0 474 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-202ENST00000396578 OR51M1Q9H341 326 aa12.21□□□□□ -0.45
COL4A3-202ENST00000396578 METTL26Q96S19 204 aa12.21□□□□□ -0.46
COL4A3-202ENST00000396578 YLPM1P49750 1951 aaKnown RBP12.21□□□□□ -0.46
COL4A3-202ENST00000396578 AHCTF1Q8WYP5 2266 aa12.21□□□□□ -0.46
COL4A3-202ENST00000396578 TRAV8-7A0A075B6U6 113 aa12.21□□□□□ -0.46
COL4A3-202ENST00000396578 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.46
COL4A3-202ENST00000396578 HOGA1Q86XE5 327 aa12.21□□□□□ -0.46
COL4A3-202ENST00000396578 A0A1B0GV72 72 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 EBLN2Q6P2I7 272 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 OR4A5Q8NH83 315 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 PHLDA3Q9Y5J5 127 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 FOXC1Q12948 553 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 OR10AG1Q8NH19 301 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 TXNDC17Q9BRA2 123 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 K7N7A8 449 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF205O95201 554 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
COL4A3-202ENST00000396578 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
COL4A3-202ENST00000396578 PCGF1Q9BSM1 259 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 HSPB7Q9UBY9 170 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 PLA2G10O15496 165 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 GAPDHP04406 335 aaKnown RBP12.2□□□□□ -0.46
COL4A3-202ENST00000396578 FAM219BQ5XKK7 198 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 RNF133Q8WVZ7 376 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 ELF5Q9UKW6 265 aaPredicted RBP12.2□□□□□ -0.46
COL4A3-202ENST00000396578 C16orf47Q6ZP98 133 aaPredicted RBP12.2□□□□□ -0.46
COL4A3-202ENST00000396578 NRIP2Q9BQI9 281 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 TNRC6CQ9HCJ0 1690 aaKnown RBP12.2□□□□□ -0.46
COL4A3-202ENST00000396578 PRSS2P07478 247 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 ZNF441Q8N8Z8 693 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 PI4KAP42356 2102 aa12.2□□□□□ -0.46
COL4A3-202ENST00000396578 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 OR4C45A6NMZ5 311 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 PEX11BO96011 259 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 HPRT1P00492 218 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 C10orf126Q8N4M7 172 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 DIRC2Q96SL1 478 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 UBTD1Q9HAC8 227 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 SLC25A10Q9UBX3 287 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-202ENST00000396578 PATJQ8NI35 1801 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 IGHV3OR15-7A0A075B7D8 119 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 H0Y980 276 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 NPBWR2P48146 333 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 RBBP6Q7Z6E9 1792 aaKnown RBP12.19□□□□□ -0.46
COL4A3-202ENST00000396578 J3QT63 122 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 FAM216AQ8WUB2 273 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 MMDQ15546 238 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 RNFT1Q5M7Z0 435 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 SCNM1Q9BWG6 230 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 PPP1R17O96001 155 aa12.19□□□□□ -0.46
COL4A3-202ENST00000396578 IGHV1OR21-1A0A087WYE8 117 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 GPBAR1Q8TDU6 330 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
COL4A3-202ENST00000396578 A0A0B4J293 547 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 SOD3P08294 240 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 SOX8P57073 446 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 WNT16Q9UBV4 365 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 PRSS23O95084 383 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 CXCL2P19875 107 aa12.18□□□□□ -0.46
COL4A3-202ENST00000396578 MDKP21741 143 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms