RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 MLLT11Q13015 90 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 EIF4EBP1Q13541 118 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR4D1Q15615 310 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 UPP1Q16831 310 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC9C1Q4G0N8 1177 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SPIN3Q5JUX0 258 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 LYPD2Q6UXB3 125 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM151BQ6UXP7 276 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 COMMD6Q7Z4G1 85 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 TGIF2LXQ8IUE1 241 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 LGI3Q8N145 548 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR4C3Q8NH37 302 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 GNPDA2Q8TDQ7 276 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ROPN1LQ96C74 230 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CMTM5Q96DZ9 223 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 NRIP2Q9BQI9 281 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR51E2Q9H255 320 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 PTGES2Q9H7Z7 377 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ECHDC1Q9NTX5 307 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ST6GALNAC2Q9UJ37 374 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 FUT9Q9Y231 359 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGLC7A0M8Q6 106 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SOCS1O15524 211 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CD5LO43866 347 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 HLA-DQB2P05538 268 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 P0C879 139 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGLC1P0CG04 106 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 GGT1P19440 569 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 LHX2P50458 406 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF140P52738 457 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF138P52744 262 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM3AP98173 230 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ST3GAL3Q11203 375 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ST3GAL4Q11206 333 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IFI44LQ53G44 452 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 HSP90AA4PQ58FG1 418 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 LRRC73Q5JTD7 316 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 MEDAGQ5VYS4 303 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 TYW3Q6IPR3 259 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SMARCD3Q6STE5 483 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 Q6ZTK2 550 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SSX7Q7RTT5 188 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 TTC9CQ8N5M4 171 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SUMF2Q8NBJ7 301 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR56B4Q8NH76 319 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SGMS2Q8NHU3 365 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SMIM19Q96E16 107 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC35E1Q96K37 410 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CXCL16Q9H2A7 254 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 RNF181Q9P0P0 153 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CDC7O00311 574 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 PHF1O43189 567 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 NUPR1O60356 82 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SNRNP200O75643 2136 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IFNA16P05015 189 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 NGFRP08138 427 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CD55P08174 381 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CXCL1P09341 107 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 COX4I1P13073 169 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 PEBP1P30086 187 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 PYCR1P32322 319 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 EIF2B2P49770 351 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 RGNQ15493 299 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 C1orf146Q5VVC0 180 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF788Q6ZQV5 615 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CATSPER3Q86XQ3 398 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 GEMIN6Q8WXD5 167 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF224Q9NZL3 707 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 NIPBLQ6KC79 2804 aaeCLIP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGSF10Q6WRI0 2623 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ANKRD20A5PA0PJZ0 165 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGSF23A1L1A6 192 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 MYBPHLA2RUH7 354 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SNRPGP15A8MWD9 76 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 TAAR5O14804 337 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ARPC5O15511 151 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 GATBO75879 557 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 GLSO94925 669 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF728P0DKX0 622 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 UCHL3P15374 230 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPS12P25398 132 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ELK4P28324 431 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 GRPRP30550 384 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 NDUFA6P56556 154 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 VSX2P58304 361 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 NCS1P62166 190 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CDK5Q00535 292 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 KRTAP15-1Q3LI76 137 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF404Q494X3 552 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM219BQ5XKK7 198 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 C22orf42Q6IC83 251 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 ERICH5Q6P6B1 374 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 C17orf107Q6ZR85 190 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 WDR31Q8NA23 367 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR2T6Q8NHC8 308 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CD200R1Q8TD46 325 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CENPNQ96H22 339 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SDF2Q99470 211 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 EFCAB1Q9HAE3 211 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms