RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 DEKP35659 375 aaKnown RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 ACTR1BP42025 376 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 RANBP1P43487 201 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 TSPAN5P62079 268 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 PRB3Q04118 309 aaPredicted RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 MRPL51Q4U2R6 128 aaKnown RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 CAVIN4Q5BKX8 364 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 ACTL10Q5JWF8 245 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 FAHD1Q6P587 224 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 ASCL4Q6XD76 172 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 C2orf91Q6ZV80 131 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 GLT6D1Q7Z4J2 308 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 OR9I1Q8NGQ6 314 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 CIDECQ96AQ7 238 aaPredicted RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 CDCA4Q9BXL8 241 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 POTEKPQ9BYX7 375 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 C11orf49Q9H6J7 331 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 C8orf4Q9NR00 106 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 ZNF469Q96JG9 3925 aaPredicted RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 PHLPP2Q6ZVD8 1323 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 IGKV3-7A0A075B6H7 116 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 B4DEV8 164 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 CRXO43186 299 aaPredicted RBP0.6□□□□□ -2.31
SRP54-214ENST00000630962 SOD1P00441 154 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 ATF1P18846 271 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 PSMA1P25786 263 aaKnown RBP0.6□□□□□ -2.31
SRP54-214ENST00000630962 TRIP13Q15645 432 aaPredicted RBP0.6□□□□□ -2.31
SRP54-214ENST00000630962 VAMP3Q15836 100 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 HSP90B2PQ58FF3 399 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 RASL11AQ6T310 242 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 UNQ6190/PRO20217Q6UXQ8 127 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 FAM19A1Q7Z5A9 133 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 PDCL2Q8N4E4 241 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 OR13C9Q8NGT0 318 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 MYCBPQ99417 103 aaPredicted RBP0.6□□□□□ -2.31
SRP54-214ENST00000630962 XKR8Q9H6D3 395 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 HAUS4Q9H6D7 363 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 ZNF532Q9HCE3 1301 aa0.6□□□□□ -2.31
SRP54-214ENST00000630962 TNIKQ9UKE5 1360 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 FBN2P35556 2912 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 K7EN84 100 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 GNRH2O43555 120 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 KDELR3O43731 214 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 VAPBO95292 243 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 CRYGCP07315 174 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 CTSEP14091 401 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 TUBG1P23258 451 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 CTBP2P56545 445 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 GABARAPL2P60520 117 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 VSNL1P62760 191 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 GBE1Q04446 702 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 BSPH1Q075Z2 132 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 XRCC4Q13426 336 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 PSG3Q16557 428 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 SSX6Q7RTT6 188 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 PID1Q7Z2X4 250 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 SYS1Q8N2H4 156 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 OR8B12Q8NGG6 310 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 LGALS14Q8TCE9 139 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 AGR3Q8TD06 166 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 SLC35G5Q96KT7 338 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 PRSS27Q9BQR3 290 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 CHID1Q9BWS9 393 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 TUBG2Q9NRH3 451 aa0.59□□□□□ -2.31
SRP54-214ENST00000630962 GOLGA6L7A0A1B0GV03 622 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 FABP7O15540 132 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 ZW10O43264 779 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 ENSAO43768 121 aaKnown RBP0.58□□□□□ -2.32
SRP54-214ENST00000630962 IGKV5-2P06315 115 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 UCHL1P09936 223 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 PRB4P10163 310 aaPredicted RBP0.58□□□□□ -2.32
SRP54-214ENST00000630962 PLCXD2Q0VAA5 305 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 TRAM1Q15629 374 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 DEFB115Q30KQ5 88 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.58□□□□□ -2.32
SRP54-214ENST00000630962 EBLN2Q6P2I7 272 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 FAM19A3Q7Z5A8 133 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 OR5J2Q8NH18 312 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 FNDC9Q8TBE3 224 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 TOP1MTQ969P6 601 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 FBXO44Q9H4M3 255 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 MED9Q9NWA0 146 aa0.58□□□□□ -2.32
SRP54-214ENST00000630962 SLX4Q8IY92 1834 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 PLCH2O75038 1416 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 IGKV2D-26A0A0A0MRZ7 120 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 TRAV41A0A0B4J266 112 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 C11orf86A6NJI1 115 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 IDH3GP51553 393 aaPredicted RBP0.57□□□□□ -2.32
SRP54-214ENST00000630962 GLO1Q04760 184 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 HENMT1Q5T8I9 393 aaKnown RBP0.57□□□□□ -2.32
SRP54-214ENST00000630962 RPS19BP1Q86WX3 136 aaKnown RBP0.57□□□□□ -2.32
SRP54-214ENST00000630962 OR5K1Q8NHB7 308 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 FAM45AQ8TCE6 357 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 MIEN1Q9BRT3 115 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 C11orf1Q9H5F2 150 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 NRBP2Q9NSY0 501 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 TMEM216Q9P0N5 145 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 SNX12Q9UMY4 172 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 FAM215AQ9Y5M1 114 aa0.57□□□□□ -2.32
SRP54-214ENST00000630962 MYO15BQ96JP2 1530 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms