RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 MRGPRDQ8TDS7 321 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 GHSRQ92847 366 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 TMEM106AQ96A25 262 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 C10orf35Q96D05 121 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 SMIM19Q96E16 107 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 TMEM80Q96HE8 168 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 Q96MT0 163 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 TMEM133Q9H2Q1 129 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 DPAGT1Q9H3H5 408 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 C16orf95Q9H693 158 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 ZNF696Q9H7X3 374 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 INPP5EQ9NRR6 644 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 GAR1Q9NY12 217 aaKnown RBP3.64□□□□□ -1.83
CUL3-216ENST00000617432 KIF25Q9UIL4 384 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 ING4Q9UNL4 249 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 TCF19Q9Y242 345 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 CAB39Q9Y376 341 aaPredicted RBP3.64□□□□□ -1.83
CUL3-216ENST00000617432 LINC00312Q9Y6C7 94 aa3.64□□□□□ -1.83
CUL3-216ENST00000617432 VWFP04275 2813 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 MEIKINA0A087WXM9 373 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 A0A087WYN8 130 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 TRBV5-7A0A0A0MS05 114 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 hADV38S2A0JD32 116 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 BTBD17A6NE02 478 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 HMX3A6NHT5 357 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 SNTNA6NMZ2 147 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 FAM25EA8MYX2 175 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 G3V4G9 280 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 SH2D1BO14796 132 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 DEGS1O15121 323 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 SLC31A2O15432 143 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 SPRY2O43597 315 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 MPZL2O60487 215 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 CYB5AP00167 134 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 MAS1P04201 325 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 CGB3P0DN86 165 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 CGB7P0DN87 165 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 NFYBP25208 207 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 MAPK3P27361 379 aaPredicted RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 GABRA5P31644 462 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 ARL3P36405 182 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 REG1BP48304 166 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 DEFA6Q01524 100 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 RBM39Q14498 530 aaKnown RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 PAN3Q58A45 887 aaKnown RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 SPIN3Q5JUX0 258 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 OR10K2Q6IF99 312 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 RPL22L1Q6P5R6 122 aaKnown RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 LYPD6Q86Y78 171 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 IQCF2Q8IXL9 164 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 Q8IYB0 196 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 C10orf67Q8IYJ2 551 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 ABHD12Q8N2K0 398 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 SUMF2Q8NBJ7 301 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 TMEM104Q8NE00 496 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 CCDC54Q8NEL0 328 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 OR13D1Q8NGV5 346 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 OR52N1Q8NH53 320 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 OR5R1Q8NH85 324 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 GPR148Q8TDV2 347 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 CCDC107Q8WV48 283 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 RDH12Q96NR8 316 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 GPER1Q99527 375 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 ZNF184Q99676 751 aaPredicted RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 CLEC7AQ9BXN2 247 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 BANF2Q9H503 90 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 HEXA-AS1Q9H8Q6 139 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 SEPSECSQ9HD40 501 aaKnown RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 FKBP14Q9NWM8 211 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 BABAM2Q9NXR7 383 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 CALYQ9NYX4 217 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 PSORS1C1Q9UIG5 152 aa3.63□□□□□ -1.83
CUL3-216ENST00000617432 LSM2Q9Y333 95 aaKnown RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 EXOSC1Q9Y3B2 195 aaKnown RBP3.63□□□□□ -1.83
CUL3-216ENST00000617432 A0A087WWL8 130 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 TRGV10A0A0A0MS01 117 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 IGHV3-72A0A0B4J1Y9 119 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 A0A1W2PPI3 338 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 VGLL3A8MV65 326 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 ZNF736B4DX44 427 aaPredicted RBP3.62□□□□□ -1.83
CUL3-216ENST00000617432 PTGES3LE9PB15 166 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 LY6LH3BQJ8 138 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 C15orf65H3BRN8 121 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 BOLA2-SMG1P6H3BVE0 249 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 RGS10O43665 173 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 OR7C1O76099 320 aaPredicted RBP3.62□□□□□ -1.83
CUL3-216ENST00000617432 NDUFB8O95169 186 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 IGLV1-47P01700 117 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 CDK1P06493 297 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 MYL12AP19105 171 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 CELP19835 753 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 DCKP27707 260 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 ERP29P30040 261 aaKnown RBP3.62□□□□□ -1.83
CUL3-216ENST00000617432 BDKRB2P30411 391 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 ZNF93P35789 620 aaPredicted RBP3.62□□□□□ -1.83
CUL3-216ENST00000617432 TGFBR2P37173 567 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 PTGFRP43088 359 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 MAP2K4P45985 399 aa3.62□□□□□ -1.83
CUL3-216ENST00000617432 RBM11P57052 281 aaKnown RBP3.62□□□□□ -1.83
CUL3-216ENST00000617432 RPS25P62851 125 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms