RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TRAV39A0A0B4J263 110 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 SPINK2P20155 84 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 STARD6P59095 220 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 OR4C12Q96R67 309 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 SLC45A2Q9UMX9 530 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 A0A1W2PPE3 182 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 GAB4Q2WGN9 574 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 SNAI3Q3KNW1 292 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 VHLLQ6RSH7 139 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 PLPPR2Q96GM1 343 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 LINC01387J3KSC0 135 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 PMELP40967 661 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 PLGLAQ15195 96 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 SMIM21Q3B7S5 101 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 FLVCR1-AS1Q8TAF5 88 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 MUCL1Q96DR8 90 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 TRIB1Q96RU8 372 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 PGLYRP1O75594 196 aaPredicted RBP12.66□□□□□ -0.38
VPS36-207ENST00000611132 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
VPS36-207ENST00000611132 OR5A2Q8NGI9 324 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 OR1L6Q8NGR2 347 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 KBTBD11O94819 623 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 CT45A6P0DMU7 189 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 CT45A5P0DMU8 189 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 CT45A7P0DMV0 189 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 SRFP11831 508 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 IER3P46695 156 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 CT45A1Q5HYN5 189 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 FNDC7Q5VTL7 733 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 SPNS3Q6ZMD2 512 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 VASH2Q86V25 355 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 CT45A3Q8NHU0 189 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 ZNF552Q9H707 407 aaPredicted RBP12.66□□□□□ -0.38
VPS36-207ENST00000611132 ATP23Q9Y6H3 246 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 C2CD4DB7Z1M9 353 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 TCF21O43680 179 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 OR5G3P0C626 314 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 HSPB9Q9BQS6 159 aa12.66□□□□□ -0.38
VPS36-207ENST00000611132 UBE2ZQ9H832 354 aaPredicted RBP12.66□□□□□ -0.38
VPS36-207ENST00000611132 CEP290O15078 2479 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 CCL3P10147 92 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FGF12P61328 243 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 CYC1P08574 325 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 LBX1P52954 281 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 ELOBQ15370 118 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 RNASEKQ6P5S7 137 aaKnown RBP12.65□□□□□ -0.38
VPS36-207ENST00000611132 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 GPR35Q9HC97 309 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A10PA6NDY2 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A8PA6NJQ4 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A7PA6NKC0 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 DBX1A6NMT0 343 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A22PA8MWA6 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 DEFB108AA8MXU0 73 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A23PA8MXZ1 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 K7N7A8 449 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 DNPH1O43598 174 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A15PP0C7V4 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A13PP0C7W8 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A14PP0C7W9 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 FAM90A24PP0C7X0 464 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 SUB1P53999 127 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS36-207ENST00000611132 FHL1Q13642 323 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 STUMQ69YW2 141 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.65□□□□□ -0.38
VPS36-207ENST00000611132 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 AHCTF1Q8WYP5 2266 aa12.65□□□□□ -0.38
VPS36-207ENST00000611132 TPRP12270 2363 aaKnown RBP12.65□□□□□ -0.39
VPS36-207ENST00000611132 TOX3O15405 576 aaPredicted RBP12.65□□□□□ -0.39
VPS36-207ENST00000611132 SCGB2A1O75556 95 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 G6PCP35575 357 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 PSG4Q00888 419 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 LPAL2Q16609 132 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 LHFPL1Q86WI0 220 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 PARLQ9H300 379 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 SH2D2AQ9NP31 389 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 CLN8Q9UBY8 286 aa12.65□□□□□ -0.39
VPS36-207ENST00000611132 SPCS3P61009 180 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 AARDQ4LEZ3 155 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 ETFRF1Q6IPR1 90 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 ZNF818PQ6ZRF7 136 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 CLDND2Q8NHS1 167 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 PSMG3Q9BT73 122 aaPredicted RBP12.64□□□□□ -0.39
VPS36-207ENST00000611132 A0A0A6YYD4 124 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 A0A0J9YW62 118 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 LRRC3CA6NJW4 275 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 DIRC3C9JPN6 131 aa12.64□□□□□ -0.39
VPS36-207ENST00000611132 TMEM250H0YL14 139 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms