RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 A0A1B0GU03 582 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 VAMP5O95183 116 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 PPBPP02775 128 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 HPNP05981 417 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 DBHP09172 617 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 CCKARP32238 428 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 MMDQ15546 238 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 RNF133Q8WVZ7 376 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 GPR35Q9HC97 309 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 G6PC2Q9NQR9 355 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 MEMO1Q9Y316 297 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 R4GMQ9 66 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 KIAA1549Q9HCM3 1950 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 A0A1B0GUS0 222 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 LOC102725191A0A1B0GVB3 256 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 DHHO43323 396 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 XRCC2O43543 280 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 OR4D6Q8NGJ1 314 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 ZNF319Q9P2F9 582 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 PAM16Q9Y3D7 125 aa13.7□□□□□ -0.22
RTN1-209ENST00000611068 E9PLN8 166 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 FOXG1P55316 489 aaPredicted RBP13.69□□□□□ -0.22
RTN1-209ENST00000611068 KLHL24Q6TFL4 600 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 CLUHP3Q96NS8 147 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 DHDHQ9UQ10 334 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 LAMP3Q9UQV4 416 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 RP1L1Q8IWN7 2480 aaPredicted RBP13.69□□□□□ -0.22
RTN1-209ENST00000611068 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 LOC107986453A0A1B0GWG9 222 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 A6NJ64 397 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 GZMHP20718 246 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 OR51E1Q8TCB6 317 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 TMEM54Q969K7 222 aa13.69□□□□□ -0.22
RTN1-209ENST00000611068 ZZEF1O43149 2961 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 A0A096LPE4 126 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 A0A1W2PPZ6 126 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 SRSF10O75494 262 aaKnown RBP13.68□□□□□ -0.22
RTN1-209ENST00000611068 ERVS71-1P61550 626 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 FAM57BQ71RH2 274 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 SGPP2Q8IWX5 399 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 ASB5Q8WWX0 329 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 C20orf144Q9BQM9 153 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 C12orf49Q9H741 205 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 KIAA1456Q9P272 454 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 SPRR3Q9UBC9 169 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 PPP5D1E7EU14 171 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 K7EM74 188 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 MSR1P21757 451 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 ZNF121P58317 390 aaPredicted RBP13.68□□□□□ -0.22
RTN1-209ENST00000611068 ENDOGQ14249 297 aaKnown RBP13.68□□□□□ -0.22
RTN1-209ENST00000611068 CEACAM16Q2WEN9 425 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 TOMM20LQ6UXN7 152 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 FGFBP3Q8TAT2 258 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 NABP1Q96AH0 204 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 PBOV1Q9GZY1 135 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 CSTL1Q9H114 145 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
RTN1-209ENST00000611068 TNFSF13O75888 250 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
RTN1-209ENST00000611068 TSPO2Q5TGU0 170 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 FGGYQ96C11 551 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 NUDT11Q96G61 164 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 FAM71F1Q96KD3 344 aaPredicted RBP13.67□□□□□ -0.22
RTN1-209ENST00000611068 SPACA5Q96QH8 159 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 CNTD2Q9H8S5 307 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 PNRC2Q9NPJ4 139 aaKnown RBP13.67□□□□□ -0.22
RTN1-209ENST00000611068 FAM206AQ9NX38 181 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 B4DEV8 164 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 NUPR1O60356 82 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 KNG1P01042 644 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 TTRP02766 147 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 OPN1MWP04001 364 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 OPN1MW2P0DN77 364 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 OPN1MW3P0DN78 364 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 NHLH1Q02575 133 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 UBE2V1Q13404 147 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 IL22RA2Q969J5 263 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 PGAM5Q96HS1 289 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 PLEK2Q9NYT0 353 aa13.67□□□□□ -0.22
RTN1-209ENST00000611068 TRGV5A0A0B4J1U4 118 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 MRPL33O75394 65 aaKnown RBP13.66□□□□□ -0.22
RTN1-209ENST00000611068 OR5G3P0C626 314 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 RAB11AP62491 216 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 ZNF506Q5JVG8 444 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 MRPL24Q96A35 216 aaKnown RBP13.66□□□□□ -0.22
RTN1-209ENST00000611068 MS4A10Q96PG2 267 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 SCNM1Q9BWG6 230 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 AK3Q9UIJ7 227 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 ZNF878C9JN71 531 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 SDCBPO00560 298 aaPredicted RBP13.66□□□□□ -0.22
RTN1-209ENST00000611068 SYNGR4O95473 234 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 UNC119Q13432 240 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 TAF9Q16594 264 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 MPV17LQ2QL34 196 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms