RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ENDOGQ14249 297 aaKnown RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ICAM4Q14773 271 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 SLC9A3R2Q15599 337 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 LDLRAD2Q5SZI1 272 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF880Q6PDB4 577 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 CD164L2Q6UWJ8 174 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 CLEC18BQ6UXF7 455 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 METTL27Q8N6F8 245 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 OR5B3Q8NH48 314 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 SPRY4Q9C004 299 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ELL3Q9HB65 397 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ADAP2Q9NPF8 381 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 IL36GQ9NZH8 169 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF319Q9P2F9 582 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TCF19Q9Y242 345 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 NOTCH4Q99466 2003 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TRAV30A0A087WSZ9 112 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 SLC17A2O00624 439 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 WDR1O75083 606 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 IMPA1P29218 277 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 CCR2P41597 374 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 CLDN18P56856 261 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 RPS4XP62701 263 aaKnown RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ACOT6Q3I5F7 207 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TDRG1Q3Y452 100 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF506Q5JVG8 444 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF684Q5T5D7 378 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 C22orf39Q6P5X5 142 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TOMM20LQ6UXN7 152 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 HOGA1Q86XE5 327 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 OR10G4Q8NGN3 311 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 FAM213BQ8TBF2 198 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ABHD3Q8WU67 409 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ASB10Q8WXI3 467 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 DOCK6Q96HP0 2047 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 Q96M85 177 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 LYRM2Q9NU23 88 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF701Q9NV72 531 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 PPIAL4AQ9Y536 164 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 NUP210Q8TEM1 1887 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 DEDDO75618 318 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 KLF8O95600 359 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 RPS4Y1P22090 263 aaKnown RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 ARR3P36575 388 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 GNB2P62879 340 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 KLF5Q13887 457 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 FZD2Q14332 565 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 NFATC4Q14934 902 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TPTE2P1Q5T6R2 138 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 SPSB3Q6PJ21 355 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 BHLHA15Q7RTS1 189 aaPredicted RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 H2BFWTQ7Z2G1 175 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 COMMD2Q86X83 199 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TMEM156Q8N614 296 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 OR2L2Q8NH16 312 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 TSSK2Q96PF2 358 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 LPAR4Q99677 370 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 VAMP8Q9BV40 100 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 PLEK2Q9NYT0 353 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 NXT1Q9UKK6 140 aaKnown RBP5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 FUT9Q9Y231 359 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 CCL26Q9Y258 94 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
TSPAN3-209ENST00000560715 PPIAL4EA0A075B759 164 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 MED19A0JLT2 244 aaPredicted RBP5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 HIDE1A8MVS5 230 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PROB1E7EW31 1015 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PPIAL4FP0DN26 164 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 HRH1P35367 487 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PLPP4Q5VZY2 271 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 FAM71F2Q6NXP2 309 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 TMEM25Q86YD3 366 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 NFAM1Q8NET5 270 aaPredicted RBP5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 OR5L1Q8NGL2 311 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PFN4Q8NHR9 129 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 IL17DQ8TAD2 202 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 TMEM230Q96A57 120 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 WDR34Q96EX3 536 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 KXD1Q9BQD3 176 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PRSS27Q9BQR3 290 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 SH3BGRL3Q9H299 93 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 WFDC1Q9HC57 220 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 POLDIP2Q9Y2S7 368 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PLXNA2O75051 1894 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF732B4DXR9 585 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 TMEM150CB9EJG8 249 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 FAM90A26D6RGX4 464 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 K7ERU9 68 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 ZIC3O60481 467 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PFN1P07737 140 aaKnown RBP5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 ZNF77Q15935 545 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 SMIM21Q3B7S5 101 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 ACTL10Q5JWF8 245 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 SP5Q6BEB4 398 aaPredicted RBP5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 Q6ZRM9 215 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 OR1F12Q8NHA8 337 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 GPR146Q96CH1 333 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 EFCAB11Q9BUY7 163 aa5.72□□□□□ -1.49
TSPAN3-209ENST00000560715 PELI2Q9HAT8 420 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms