RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 CTDSP1Q9GZU7 261 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 FSCN3Q9NQT6 498 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF586Q9NXT0 402 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 MTCH1Q9NZJ7 389 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 GNG12Q9UBI6 72 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 SH3BGRL2Q9UJC5 107 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 POMT1Q9Y6A1 747 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ARL2-SNX15V9GYD0 113 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 DOCK11Q5JSL3 2073 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 IGHV5-51A0A0C4DH38 117 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 C20orf202A1L168 122 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 COLCA2A8K830 154 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 CER1O95813 267 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF708P17019 499 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ADCYAP1P18509 176 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PTGER4P35408 488 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 MSMO1Q15800 293 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF141Q15928 474 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 HLA-BQ31612 363 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 SPATA46Q5T0L3 261 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 RTN4RL2Q86UN3 420 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 HOGA1Q86XE5 327 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 OSR2Q8N2R0 312 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 OR52M1Q8NGK5 317 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 OR2T10Q8NGZ9 312 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 RFESDQ8TAC1 157 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF596Q8TC21 504 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 NT5CQ8TCD5 201 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 EXTL1Q92935 676 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 OR6C1Q96RD1 312 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 RNF126Q9BV68 326 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 LPAR5Q9H1C0 372 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ICAM5Q9UMF0 924 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 CUL9Q8IWT3 2517 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 MRPL33O75394 65 aaKnown RBP4.74□□□□□ -1.65
LIMA1-203ENST00000547825 AGFG2O95081 481 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 NXPH2O95156 264 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 SYNGR4O95473 234 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 CD8AP01732 235 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 SLC25A6P12236 298 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 CSRP1P21291 193 aaKnown RBP4.74□□□□□ -1.65
LIMA1-203ENST00000547825 AMTP48728 403 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 RAB31Q13636 194 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PNLIPRP3Q17RR3 467 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 OR10P1Q8NGE3 313 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PITPNC1Q9UKF7 332 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PCNX1Q96RV3 2341 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ABCA7Q8IZY2 2146 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 OTOGLQ3ZCN5 2332 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 DHRS7CA6NNS2 312 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 F6UZH7 168 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 FCN1O00602 326 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 SCRG1O75711 98 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PLA2G1BP04054 148 aaKnown RBP4.73□□□□□ -1.65
LIMA1-203ENST00000547825 SEC11BP0C7V7 166 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF883P0CG24 379 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ERGP11308 486 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 GYPEP15421 78 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 GDF1P27539 372 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 CD38P28907 300 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 APOBEC1P41238 236 aaKnown RBP4.73□□□□□ -1.65
LIMA1-203ENST00000547825 GABRA2P47869 451 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 P2RY1P47900 373 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 TCTAP57738 103 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PAX5Q02548 391 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 COTL1Q14019 142 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PYY3Q5JQD4 70 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 Q6ZN92 141 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 EIF4E3Q8N5X7 224 aaKnown RBP4.73□□□□□ -1.65
LIMA1-203ENST00000547825 OR5D13Q8NGL4 314 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 MCHR2Q969V1 340 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 NTNG2Q96CW9 530 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 DDA1Q9BW61 102 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 CCL28Q9NRJ3 127 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PLA2G3Q9NZ20 509 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PISDQ9UG56 409 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 CACFD1Q9UGQ2 172 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 NAT8BQ9UHF3 227 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 CARHSP1Q9Y2V2 147 aaKnown RBP4.73□□□□□ -1.65
LIMA1-203ENST00000547825 TMED3Q9Y3Q3 217 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PI4KAP42356 2102 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 MYO7BQ6PIF6 2116 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 LY6G6EA0A0G2JKS1 128 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 LOC102725191A0A1B0GVB3 256 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 DEGS1O15121 323 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 SLC31A2O15432 143 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 DHHO43323 396 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 OPN1MWP04001 364 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 OPN1MW2P0DN77 364 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 OPN1MW3P0DN78 364 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 GPM6AP51674 278 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ERVFC1-1P60608 527 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ERVK-16P61578 105 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 PPP1CBP62140 327 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 LPAL2Q16609 132 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF774Q6NX45 483 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 ERASQ7Z444 233 aa4.73□□□□□ -1.65
LIMA1-203ENST00000547825 TBC1D26Q86UD7 250 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms