RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	NDP	Q00604	133 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	DOC2B	Q14184	412 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	GNMT	Q14749	295 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161		Q3ZCU0	254 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	SYT6	Q5T7P8	510 aa	Predicted RBP	10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	MEDAG	Q5VYS4	303 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	ACSM6	Q6P461	480 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	CPNE2	Q96FN4	548 aa	Predicted RBP	10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	CENPN	Q96H22	339 aa	Predicted RBP	10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	CHCHD6	Q9BRQ6	235 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	ERVK13-1	Q9NX77	482 aa		10.56	□□□□□ -0.72
SAMM50-204	ENST00000493161	LINC01619	G3V211	115 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	HLA-DRB1	P01911	266 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	HBZ	P02008	142 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	CSTB	P04080	98 aa	Known RBP	10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	ALPL	P05186	524 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	IGHV4-30-4	P0DP06	118 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	GABRB1	P18505	474 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	RCC1	P18754	421 aa	Predicted RBP	10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	ZNF93	P35789	620 aa	Predicted RBP	10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	SLC22A6	Q4U2R8	563 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	C19orf54	Q5BKX5	351 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	DDI2	Q5TDH0	399 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	ODF3L1	Q8IXM7	274 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161		Q8N1Y9	231 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	MRPL20	Q9BYC9	149 aa	Known RBP	10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	TOLLIP	Q9H0E2	274 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	TRAPPC2L	Q9UL33	140 aa		10.55	□□□□□ -0.72
SAMM50-204	ENST00000493161	NBR2	O15453	112 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	SPINT2	O43291	252 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	FCGR1A	P12314	374 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	SNRPB	P14678	240 aa	Known RBP	10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	GBX2	P52951	348 aa	Predicted RBP	10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	ECSCR	Q19T08	205 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	C5orf64	Q2M2E5	130 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	MPV17L	Q2QL34	196 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	LINC00596	Q86U02	117 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	OR52L2P	Q8NGH6	319 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	OR6Q1	Q8NGQ2	317 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	TMEM106A	Q96A25	262 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	MRPL48	Q96GC5	212 aa	Known RBP	10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	NABP2	Q9BQ15	211 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161	TMEM138	Q9NPI0	162 aa		10.54	□□□□□ -0.72
SAMM50-204	ENST00000493161		A0A1W2PN81	502 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	EI24	O14681	340 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	LDLRAD4	O15165	306 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	IGHV3-11	P01762	117 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	LGALS1	P09382	135 aa	Known RBP	10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	EGR2	P11161	476 aa	Predicted RBP	10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	CHRNA7	P36544	502 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	PPP1CC	P36873	323 aa	Known RBP	10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	OR3A3	P47888	321 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	MORN2	Q502X0	79 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	C1orf146	Q5VVC0	180 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	LIN54	Q6MZP7	749 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	STX19	Q8N4C7	294 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	OR52I1	Q8NGK6	324 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	OR13C5	Q8NGS8	318 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	GPR148	Q8TDV2	347 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	ISOC1	Q96CN7	298 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	ZNF251	Q9BRH9	671 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	OR2S2	Q9NQN1	319 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	C19orf73	Q9NVV2	129 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	ETAA1	Q9NY74	926 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	RCC2	Q9P258	522 aa	Known RBP	10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	A3GALT2	U3KPV4	340 aa		10.53	□□□□□ -0.72
SAMM50-204	ENST00000493161	MCRIP1	C9JLW8	97 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	FCN1	O00602	326 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	FADS2	O95864	444 aa	Known RBP	10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	OR8U9	P0C7N5	309 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	LIMS3	P0CW19	117 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	LIMS4	P0CW20	117 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	GTF2F2	P13984	249 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	BDKRB2	P30411	391 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	MRPL28	Q13084	256 aa	Known RBP	10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	LRRC36	Q1X8D7	754 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	STEAP3	Q658P3	488 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	RAB12	Q6IQ22	244 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	GAPT	Q8N292	157 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	NPB	Q8NG41	125 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	S100A13	Q99584	98 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	ZNF184	Q99676	751 aa	Predicted RBP	10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	GHITM	Q9H3K2	345 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	TAF9B	Q9HBM6	251 aa		10.52	□□□□□ -0.73
SAMM50-204	ENST00000493161	UBE2QL1	A1L167	161 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	SNTN	A6NMZ2	147 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	NDUFA3	O95167	84 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	CD2	P06729	351 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	IGFBP3	P17936	291 aa	Predicted RBP	10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	PPP3R1	P63098	170 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	CX3CL1	P78423	397 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	C6orf183	Q5T699	404 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	MS4A10	Q96PG2	267 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	OR4C12	Q96R67	309 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	ABHD14A	Q9BUJ0	271 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	FBXL15	Q9H469	300 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	BANF2	Q9H503	90 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	GAB2	Q9UQC2	676 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	FOXA2	Q9Y261	457 aa	Predicted RBP	10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	GMPPB	Q9Y5P6	360 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms