RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 LINC00311Q8N616 119 aa12.6□□□□□ -0.39
GABPA-203ENST00000487266 DTX3Q8N9I9 347 aa12.6□□□□□ -0.39
GABPA-203ENST00000487266 OR52L2PQ8NGH6 319 aa12.6□□□□□ -0.39
GABPA-203ENST00000487266 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
GABPA-203ENST00000487266 TM2D1Q9BX74 207 aa12.6□□□□□ -0.39
GABPA-203ENST00000487266 MBNL3Q9NUK0 354 aaKnown RBP12.6□□□□□ -0.39
GABPA-203ENST00000487266 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
GABPA-203ENST00000487266 SHISA3A0PJX4 238 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 ZNF736B4DX44 427 aaPredicted RBP12.59□□□□□ -0.39
GABPA-203ENST00000487266 H3BUI4 141 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 SLC17A2O00624 439 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 SOCS1O15524 211 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 CA11O75493 328 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 BPNT1O95861 308 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 CT45A1Q5HYN5 189 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
GABPA-203ENST00000487266 THNSL2Q86YJ6 484 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 OR5AU1Q8NGC0 362 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 CT45A3Q8NHU0 189 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 KCNG3Q8TAE7 436 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
GABPA-203ENST00000487266 ST6GALNAC6Q969X2 333 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 NEDD4LQ96PU5 975 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 HDHD3Q9BSH5 251 aaPredicted RBP12.59□□□□□ -0.39
GABPA-203ENST00000487266 LPAR5Q9H1C0 372 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 OR2S2Q9NQN1 319 aa12.59□□□□□ -0.39
GABPA-203ENST00000487266 ARL6IP5O75915 188 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
GABPA-203ENST00000487266 GLAP06280 429 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 ARSBP15848 533 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 PSMA1P25786 263 aaKnown RBP12.58□□□□□ -0.4
GABPA-203ENST00000487266 BLVRBP30043 206 aaPredicted RBP12.58□□□□□ -0.4
GABPA-203ENST00000487266 PPP1CCP36873 323 aaKnown RBP12.58□□□□□ -0.4
GABPA-203ENST00000487266 OR10A3P58181 314 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 EMX1Q04741 257 aaPredicted RBP12.58□□□□□ -0.4
GABPA-203ENST00000487266 TRAM1Q15629 374 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 HMGN3Q15651 99 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 RAB11BQ15907 218 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 HES5Q5TA89 166 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 OR51D1Q8NGF3 324 aa12.58□□□□□ -0.4
GABPA-203ENST00000487266 IL3RAP26951 378 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 TRAT1Q6PIZ9 186 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
GABPA-203ENST00000487266 NDUFA11Q86Y39 141 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 IZUMO1Q8IYV9 350 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 SVOPQ8N4V2 548 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 Q8N6K4 173 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 SETD6Q8TBK2 473 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
GABPA-203ENST00000487266 NOL4LQ96MY1 436 aaPredicted RBP12.57□□□□□ -0.4
GABPA-203ENST00000487266 NDUFB11Q9NX14 153 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 KCNIP1Q9NZI2 227 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 AK3Q9UIJ7 227 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 LINC00527Q9UJ94 153 aa12.57□□□□□ -0.4
GABPA-203ENST00000487266 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 FOXI3A8MTJ6 420 aaPredicted RBP12.56□□□□□ -0.4
GABPA-203ENST00000487266 G3V4G9 280 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 M0QZK8 103 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 NAPSAO96009 420 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 OPN1MWP04001 364 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 OPN1MW2P0DN77 364 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 OPN1MW3P0DN78 364 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 ZNF137PP52743 207 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 Q3ZCU0 254 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 MORN2Q502X0 79 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 OR2W3Q7Z3T1 314 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 TGIF2LXQ8IUE1 241 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 ODF3L1Q8IXM7 274 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 ABHD14AQ9BUJ0 271 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 CHMP1AQ9HD42 196 aaPredicted RBP12.56□□□□□ -0.4
GABPA-203ENST00000487266 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 JPT1Q9UK76 154 aa12.56□□□□□ -0.4
GABPA-203ENST00000487266 A0A0B4J203 849 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 LINC01548A6NM66 108 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 VEGFCP49767 419 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 CD83Q01151 205 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 EBI3Q14213 229 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 ZNF329Q86UD4 541 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 SPARTQ8N0X7 666 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 FAM3DQ96BQ1 224 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 ARHGAP5-AS1Q96IT6 56 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 PARP12Q9H0J9 701 aaKnown RBP12.55□□□□□ -0.4
GABPA-203ENST00000487266 RAB9BQ9NP90 201 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 V9GY05 133 aa12.55□□□□□ -0.4
GABPA-203ENST00000487266 NCBP2LA6PVI3 153 aaKnown RBP12.54□□□□□ -0.4
GABPA-203ENST00000487266 LDLRAD4O15165 306 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 ST8SIA5O15466 376 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 DENRO43583 198 aaKnown RBP12.54□□□□□ -0.4
GABPA-203ENST00000487266 PSMB9P28065 219 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 OR3A3P47888 321 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 TMEM50BP56557 158 aa12.54□□□□□ -0.4
GABPA-203ENST00000487266 C2orf76Q3KRA6 126 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms