RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	LGALS14	Q8TCE9	139 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	DYNC2LI1	Q8TCX1	351 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	MRGPRD	Q8TDS7	321 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	NEK7	Q8TDX7	302 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	ARL11	Q969Q4	196 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	ARHGAP5-AS1	Q96IT6	56 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF48	Q96MX3	618 aa	Predicted RBP	4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	CMSS1	Q9BQ75	279 aa	Known RBP	4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	NICN1	Q9BSH3	213 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	BANF2	Q9H503	90 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	C16orf95	Q9H693	158 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	TAF9B	Q9HBM6	251 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	SIRT7	Q9NRC8	400 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	AK3	Q9UIJ7	227 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	DAPK2	Q9UIK4	370 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	TRAPPC2L	Q9UL33	140 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	PSG11	Q9UQ72	335 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAM96B	Q9Y3D0	163 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FBN1	P35555	2871 aa	Known RBP	4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525		A0A0U1RQK1	487 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525		A0A1W2PPI3	338 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	MEIOC	A2RUB1	952 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	DNAJC9-AS1	A6NH13	148 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR5H14	A6NHG9	310 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	SDCBP	O00560	298 aa	Predicted RBP	4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	TOR1A	O14656	332 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	RAB29	O14966	203 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	FABP7	O15540	132 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	NOL3	O60936	208 aa	Known RBP	4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	PAH	P00439	452 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	GAPDH	P04406	335 aa	Known RBP	4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ARG1	P05089	322 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	CD3G	P09693	182 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	CD1B	P29016	333 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	MC5R	P33032	325 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	VEGFC	P49767	419 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	CLDN12	P56749	244 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	GMFB	P60983	142 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	NCS1	P62166	190 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	SCN1B	Q07699	218 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	HNRNPA0	Q13151	305 aa	Known RBP	4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC9A3R2	Q15599	337 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	DEFB112	Q30KQ8	113 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	MORN2	Q502X0	79 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	TPTE2P1	Q5T6R2	138 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR10K2	Q6IF99	312 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF833P	Q6ZTB9	187 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	PNKD	Q8N490	385 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	TCTEX1D1	Q8N7M0	179 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	TPRX1	Q8N7U7	411 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZBTB34	Q8NCN2	500 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR4M1	Q8NGD0	313 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	PIFO	Q8TCI5	191 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ISOC1	Q96CN7	298 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC6A7	Q99884	636 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAAP24	Q9BTP7	215 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ABHD14A	Q9BUJ0	271 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLIRP	Q9GZT3	109 aa	Known RBP	4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	MMP27	Q9H306	513 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	AUNIP	Q9H7T9	357 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF286A	Q9HBT8	521 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	TCF19	Q9Y242	345 aa		4.11	□□□□□ -1.75
HDAC6-223	ENST00000480525	ANK2	Q01484	3957 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525		A6NDX4	124 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525		H3BMQ9	156 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	HSD17B6	O14756	317 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ST8SIA5	O15466	376 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TUSC2	O75896	110 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	MMP23A	O75900	390 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR2F2	O95006	317 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	VENTX	O95231	258 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	SPDEF	O95238	335 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TFF1	P04155	84 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAM106CP	P0CH98	169 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC2A2	P11168	524 aa	Predicted RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RCC1	P18754	421 aa	Predicted RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TALDO1	P37837	337 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBMX	P38159	391 aa	Known RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ETV6	P41212	452 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RAB13	P51153	203 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	EFNB2	P52799	333 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	SNU13	P55769	128 aa	Known RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TAS2R46	P59540	309 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	GNG2	P59768	71 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ACTB	P60709	375 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	VBP1	P61758	197 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ACTG1	P63261	375 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	BAMBI	Q13145	260 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	MOGAT2	Q3SYC2	334 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ACTBL2	Q562R1	376 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	NKAPL	Q5M9Q1	402 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TMEM69	Q5SWH9	247 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	IDNK	Q5T6J7	187 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	PRAMEF5	Q5TYX0	476 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	DHRS11	Q6UWP2	260 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	BRD3OS	Q6XYD6	125 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525		Q6ZPA2	131 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525		Q71RC1	249 aa	Predicted RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OVCH2	Q7RTZ1	564 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms