RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 SLC26A10Q8NG04 563 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 OR4F17Q8NGA8 305 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 OR9Q1Q8NGQ5 310 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 CNIH3Q8TBE1 160 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 ITLN1Q8WWA0 313 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 TRUB1Q8WWH5 349 aaKnown RBP4.41□□□□□ -1.7
SSR3-207ENST00000478842 MCHR2Q969V1 340 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 C9orf85Q96MD7 179 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 OR4F4Q96R69 305 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 PRRG3Q9BZD7 231 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 NDEL1Q9GZM8 345 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 FN3KRPQ9HA64 309 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 PAK1IP1Q9NWT1 392 aaPredicted RBP4.41□□□□□ -1.7
SSR3-207ENST00000478842 MRPL22Q9NWU5 206 aaKnown RBP4.41□□□□□ -1.7
SSR3-207ENST00000478842 TVP23BQ9NYZ1 205 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 GLTPQ9NZD2 209 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 DNAJC27Q9NZQ0 273 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 ZNF581Q9P0T4 197 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 FOXJ3Q9UPW0 622 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 ORC6Q9Y5N6 252 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 SOX21Q9Y651 276 aaPredicted RBP4.41□□□□□ -1.7
SSR3-207ENST00000478842 COMMD3-BMI1R4GMX3 469 aa4.41□□□□□ -1.7
SSR3-207ENST00000478842 TRAV40A0A0B4J280 105 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 IGHV2-70DA0A0C4DH43 119 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 TRBV7-9A0A0J9YWB2 115 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 RNF222A6NCQ9 220 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 TRIM64CA6NLI5 447 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 H3BSA7 217 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 MPZL2O60487 215 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 KBTBD11O94819 623 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 FARS2O95363 451 aaKnown RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 IFNGP01579 166 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 GYPBP06028 91 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 MMP7P09237 267 aaPredicted RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 DBTP11182 482 aaKnown RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 PIPP12273 146 aaPredicted RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 CRHBPP24387 322 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 HTR1FP30939 366 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 FMO3P31513 532 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 PYCR1P32322 319 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 MDH2P40926 338 aaKnown RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 CSNK1A1P48729 337 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 CDC42P60953 191 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 CXCR4P61073 352 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 HIST1H3AP68431 136 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 SLC35A2P78381 396 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 TMED1Q13445 227 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 ENDOGQ14249 297 aaKnown RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 TBC1D28Q2M2D7 210 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 KRTAP27-1Q3LI81 207 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 THEM4Q5T1C6 240 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 HIST2H3PS2Q5TEC6 136 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 GPR157Q5UAW9 335 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 CARD17Q5XLA6 110 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 ZNF774Q6NX45 483 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 TMEM53Q6P2H8 277 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 HIST2H3AQ71DI3 136 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 GID4Q8IVV7 300 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 SKA3Q8IX90 412 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 C8orf59Q8N0T1 100 aaPredicted RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 SLC22A24Q8N4F4 322 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 ZNF555Q8NEP9 628 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 PLEKHA8Q96JA3 519 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 IL4I1Q96RQ9 567 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 APOL4Q9BPW4 351 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 ULBP2Q9BZM5 246 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 DUSP21Q9H596 190 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 RPRD1BQ9NQG5 326 aaKnown RBP4.4□□□□□ -1.71
SSR3-207ENST00000478842 POLE4Q9NR33 117 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 TMEM106BQ9NUM4 274 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 TMEM38BQ9NVV0 291 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 B9D1Q9UPM9 204 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 LHFPL6Q9Y693 200 aa4.4□□□□□ -1.71
SSR3-207ENST00000478842 ZSCAN5BA6NJL1 495 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 ZNF726A6NNF4 738 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 H0YL77 283 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 XKRYO14609 159 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 SLC16A7O60669 478 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 NOL3O60936 208 aaKnown RBP4.39□□□□□ -1.71
SSR3-207ENST00000478842 LIMS3P0CW19 117 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 LIMS4P0CW20 117 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
SSR3-207ENST00000478842 TUBG1P23258 451 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 TGFBR2P37173 567 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 HTR5AP47898 357 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 GABARAPL2P60520 117 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 ERVS71-1P61550 626 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 IL5RAQ01344 420 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 APOFQ13790 326 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 HERPUD1Q15011 391 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 ZMYND11Q15326 602 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 SLC36A2Q495M3 483 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 KCTD21Q4G0X4 260 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 TEX30Q5JUR7 227 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 ZNF684Q5T5D7 378 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 MEDAGQ5VYS4 303 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 OTPQ5XKR4 325 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 REG3GQ6UW15 175 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 BRD3OSQ6XYD6 125 aa4.39□□□□□ -1.71
SSR3-207ENST00000478842 ADAMTSL5Q6ZMM2 481 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms