RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CNBD2Q96M20 576 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 PLGRKTQ9HBL7 147 aa15.94■□□□□ 0.14
LRCH3-208ENST00000443727 SLC22A1O15245 554 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 TXNL1O43396 289 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 ARL6IP5O75915 188 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 BPNT1O95861 308 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 CRHBPP24387 322 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 PSMA1P25786 263 aaKnown RBP15.93■□□□□ 0.14
LRCH3-208ENST00000443727 CHATP28329 748 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 RPS25P62851 125 aaKnown RBP15.93■□□□□ 0.14
LRCH3-208ENST00000443727 TPBGQ13641 420 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 CT45A1Q5HYN5 189 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 SAMD5Q5TGI4 173 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 C10orf99Q6UWK7 81 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 PRSS48Q7RTY5 328 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 ZNF554Q86TJ5 538 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 IZUMO1Q8IYV9 350 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 CT45A3Q8NHU0 189 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 MRPL30Q8TCC3 161 aaKnown RBP15.93■□□□□ 0.14
LRCH3-208ENST00000443727 SULT4A1Q9BR01 284 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 FAAP24Q9BTP7 215 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 CHMP1AQ9HD42 196 aaPredicted RBP15.93■□□□□ 0.14
LRCH3-208ENST00000443727 ISYNA1Q9NPH2 558 aa15.93■□□□□ 0.14
LRCH3-208ENST00000443727 PF4P02776 101 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 CD1BP29016 333 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 MAP2K4P45985 399 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 ZNF134P52741 427 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 MLLT11Q13015 90 aaPredicted RBP15.92■□□□□ 0.14
LRCH3-208ENST00000443727 EBI3Q14213 229 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 P2RY14Q15391 338 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 BEAN1Q3B7T3 259 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 STEAP3Q658P3 488 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 C6orf201Q7Z4U5 140 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 SLC35E3Q7Z769 313 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 ZNF329Q86UD4 541 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 FOXRED2Q8IWF2 684 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 ZNF439Q8NDP4 499 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 OR52L2PQ8NGH6 319 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 CHPT1Q8WUD6 406 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 ST6GALNAC6Q969X2 333 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 CYYR1Q96J86 154 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 KCNK15Q9H427 330 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 MBNL3Q9NUK0 354 aaKnown RBP15.92■□□□□ 0.14
LRCH3-208ENST00000443727 ABRACLQ9P1F3 81 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 BLOC1S6Q9UL45 172 aa15.92■□□□□ 0.14
LRCH3-208ENST00000443727 TGP01266 2768 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 RGS11O94810 467 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 MOSP00540 346 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 ARSBP15848 533 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 CPEP16870 476 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 CD33P20138 364 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 BLVRBP30043 206 aaPredicted RBP15.91■□□□□ 0.14
LRCH3-208ENST00000443727 SLC35B1P78383 322 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 UNC119Q13432 240 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 MORN2Q502X0 79 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 OXLD1Q5BKU9 147 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 TMEM91Q6ZNR0 172 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 SETD6Q8TBK2 473 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 GALMQ96C23 342 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 NOL4LQ96MY1 436 aaPredicted RBP15.91■□□□□ 0.14
LRCH3-208ENST00000443727 MGLLQ99685 303 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 NICN1Q9BSH3 213 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 PLEKHJ1Q9NW61 149 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 AK6Q9Y3D8 172 aaKnown RBP15.91■□□□□ 0.14
LRCH3-208ENST00000443727 LRRC42Q9Y546 428 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 NOTCH3Q9UM47 2321 aa15.91■□□□□ 0.14
LRCH3-208ENST00000443727 CALRP27797 417 aaKnown RBP15.9■□□□□ 0.14
LRCH3-208ENST00000443727 PPP1CCP36873 323 aaKnown RBP15.9■□□□□ 0.14
LRCH3-208ENST00000443727 GNMTQ14749 295 aa15.9■□□□□ 0.14
LRCH3-208ENST00000443727 RAB11BQ15907 218 aa15.9■□□□□ 0.14
LRCH3-208ENST00000443727 URM1Q9BTM9 101 aaKnown RBP15.9■□□□□ 0.14
LRCH3-208ENST00000443727 ABHD14AQ9BUJ0 271 aa15.9■□□□□ 0.14
LRCH3-208ENST00000443727 TM2D1Q9BX74 207 aa15.9■□□□□ 0.14
LRCH3-208ENST00000443727 LINC00527Q9UJ94 153 aa15.9■□□□□ 0.14
LRCH3-208ENST00000443727 JPT1Q9UK76 154 aa15.9■□□□□ 0.14
LRCH3-208ENST00000443727 PLXNB1O43157 2135 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 TMEM14DPA8MWL7 114 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 ZNF736B4DX44 427 aaPredicted RBP15.89■□□□□ 0.13
LRCH3-208ENST00000443727 SLC17A2O00624 439 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 IGHG2P01859 326 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 ZNF137PP52743 207 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 HTD2P86397 168 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 KPRPQ5T749 579 aaPredicted RBP15.89■□□□□ 0.13
LRCH3-208ENST00000443727 OR2W3Q7Z3T1 314 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 C5orf24Q7Z6I8 188 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 IL1F10Q8WWZ1 152 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 RASL11BQ9BPW5 248 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 ACOT13Q9NPJ3 140 aa15.89■□□□□ 0.13
LRCH3-208ENST00000443727 LIN7CQ9NUP9 197 aaKnown RBP15.89■□□□□ 0.13
LRCH3-208ENST00000443727 LANCL1O43813 399 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 PRB2P02812 416 aaPredicted RBP15.88■□□□□ 0.13
LRCH3-208ENST00000443727 CD37P11049 281 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 RANBP1P43487 201 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 QRFPP83859 136 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 FABP5Q01469 135 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 Q8N6K4 173 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 OR2AK2Q8NG84 335 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 OR8H1Q8NGG4 311 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 STEAP1Q9UHE8 339 aa15.88■□□□□ 0.13
LRCH3-208ENST00000443727 AP4M1O00189 453 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms