RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TFF2Q03403 129 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 NHLRC3Q5JS37 347 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 LYRM7Q5U5X0 104 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 GBGT1Q8N5D6 347 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 M0QZ24 198 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 CCL3P10147 92 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 ADAMTS17Q8TE56 1095 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 SLC25A38Q96DW6 304 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 DLEC1Q9Y238 1755 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 ZIC3O60481 467 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 GCM2O75603 506 aaPredicted RBP10.49□□□□□ -0.73
UBR4-205ENST00000417040 GGTLC2Q14390 218 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 ERASQ7Z444 233 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 DOLPP1Q86YN1 238 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 C9orf40Q8IXQ3 194 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 SGK494Q96LW2 274 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 ZNF385AQ96PM9 386 aaKnown RBP10.49□□□□□ -0.73
UBR4-205ENST00000417040 RASL10BQ96S79 203 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 RBKSQ9H477 322 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 P2RY4P51582 365 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 TMEM211Q6ICI0 200 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 RNF133Q8WVZ7 376 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 ABHD14BQ96IU4 210 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 RASL11BQ9BPW5 248 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 RNF122Q9H9V4 155 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 PXMP4Q9Y6I8 212 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 NINQ8N4C6 2090 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 PRRX1P54821 245 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 HFEQ30201 348 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 CARFQ8N187 725 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 HIST1H2BAQ96A08 127 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
UBR4-205ENST00000417040 OR2J1Q9GZK6 312 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 ZNF502Q8TBZ5 544 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 GPR35Q9HC97 309 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 ZFP30Q9Y2G7 519 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 SCN3AQ9NY46 2000 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 K7EQS6 105 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 M0R3E3 92 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 GNG7O60262 68 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 PAFAH1B2P68402 229 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 IZUMO4Q1ZYL8 232 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 LAIR2Q6ISS4 152 aa10.48□□□□□ -0.73
UBR4-205ENST00000417040 SOX8P57073 446 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 FUT5Q11128 374 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 PAXXQ9BUH6 204 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 ZNF107Q9UII5 783 aaPredicted RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 MPC1Q9Y5U8 109 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 RND3P61587 244 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 SLC25A40Q8TBP6 338 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 PERPQ96FX8 193 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 PIPOXQ9P0Z9 390 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 WISP3O95389 354 aaPredicted RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 GCGP01275 180 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 HIST1H1EP10412 219 aaKnown RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 RBM11P57052 281 aaKnown RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 HERVK_113P61574 105 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 RSPO4Q2I0M5 234 aaPredicted RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 OR8B3Q8NGG8 313 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 CHST5Q9GZS9 411 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 SPINT1O43278 529 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 SRD5A2P31213 254 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 TMEM252Q8N6L7 170 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 HARBI1Q96MB7 349 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 NEU1Q99519 415 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 OR2A4O95047 310 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 CDS2O95674 445 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 LSM6P62312 80 aaKnown RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 IBA57Q5T440 356 aaKnown RBP10.47□□□□□ -0.73
UBR4-205ENST00000417040 OR2A7Q96R45 310 aa10.47□□□□□ -0.73
UBR4-205ENST00000417040 LOC101059948A0A1B0GTJ6 334 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 SDHCQ99643 169 aaPredicted RBP10.46□□□□□ -0.73
UBR4-205ENST00000417040 TMEM38BQ9NVV0 291 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 NGFRP08138 427 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 DLX1P56177 255 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 OR1N2Q8NGR9 330 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 CT55Q8WUE5 264 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 PARLQ9H300 379 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 TBX21Q9UL17 535 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 DOCK1Q14185 1865 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 EGR1P18146 543 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 ERVFRD-1P60508 538 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 OR1L1Q8NH94 360 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 IP6K3Q96PC2 410 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 NUDT16L1Q9BRJ7 211 aaKnown RBP10.46□□□□□ -0.73
UBR4-205ENST00000417040 FOXJ2Q9P0K8 574 aa10.46□□□□□ -0.73
UBR4-205ENST00000417040 A0A1W2PQD3 144 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 J3QR06 171 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 M0R296 226 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 OR4A8P0C604 315 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 ZP1P60852 638 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 FBLIM1Q8WUP2 373 aa10.46□□□□□ -0.74
UBR4-205ENST00000417040 SNRNP40Q96DI7 357 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms